DRSC/TRiP Functional Genomics Resources

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Protein Alignment yki and hecw1b

DIOPT Version :9

Sequence 1:NP_001350857.1 Gene:yki / 37851 FlyBaseID:FBgn0034970 Length:418 Species:Drosophila melanogaster
Sequence 2:XP_021336549.1 Gene:hecw1b / 563730 ZFINID:ZDB-GENE-060503-2 Length:1555 Species:Danio rerio


Alignment Length:457 Identity:90/457 - (19%)
Similarity:142/457 - (31%) Gaps:198/457 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 NQDTDDNLQALFDSVLNPGDAKRPLQLPLRMRKLPNSFFTPPAPSHSRANSADSTYDAGSQSSIN 125
            :::.::....|.|..|.|...:|.|               |.:.||.|.                
Zfish   582 DEEEEEEGVTLEDHALTPNGPRRTL---------------PRSRSHERL---------------- 615

  Fly   126 IGNKASIVQQPDGQS-PIAAIPQLQIQPSPQHSRLAI--HHSRARSSPASLQQNYNVRARSDAAA 187
                :.::|..||.. |:.|..|...|.||..|.:|.  |.|...|.|        :||:|..:|
Zfish   616 ----SDLIQMLDGDGHPLGAEGQTGNQRSPDLSPVACCSHMSPRASGP--------IRAQSLDSA 668

  Fly   188 ANNPNANPSSQ------QQPAGPTFPENSAQEFPSGAPASSAIDLDAMNTCMSQDIPMS-MQTVH 245
            ..:.:...|||      :||.|....|...::   ||......|    .:|..::.|.| :|:.|
Zfish   669 RRSESTVFSSQDDEDEMEQPNGILGSETETEQ---GAQCREPGD----GSCQWEEAPDSHVQSPH 726

  Fly   246 KKQRSYDVIS-------PIQLNR----QLGA--------------LPPGWEQAKTNDGQIYYLNH 285
            ....:.:|..       |:..|.    ||.|              |||.||....:.|:::|::|
Zfish   727 GIVGNGEVAGPSGRRECPLPCNHPAVSQLPALRPDPHHYPTIDEPLPPNWEARIDSHGRVFYVDH 791

  Fly   286 TTKSTQWEDP-------------RIQYRQQ--------QQILMAERIKQ------ND-------- 315
            ..::|.|:.|             .:|..:|        |:.:..||.::      ||        
Zfish   792 INRTTTWQRPTSAATPDGLRRSGSVQQMEQLNRRYQTIQRTMATERREEESGSPRNDRTANTETD 856

  Fly   316 -VLQTT---KQTTTS-------------------------------------------------- 326
             .|||.   :.|:.|                                                  
Zfish   857 SPLQTNELRRDTSCSPGHCQKITLLLQSPAVKFITHPEFFTVLHANYGAYRMFTNSSCLKHMVLK 921

  Fly   327 ------------------TIANNLG----PLPDGWEQAVTESGDLYFINHIDRTTSWNDPR--MQ 367
                              |..|...    .||.|||......|..:|::|..|.|::.|||  :|
Zfish   922 IRRDARNFERYQHNRDLVTFLNRFADAQLELPRGWEIKTDPQGKSFFVDHNSRATTFIDPRIPLQ 986

  Fly   368 SG 369
            :|
Zfish   987 NG 988

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ykiNP_001350857.1 HUL4 <261..>404 CDD:227354 43/240 (18%)
WW 266..295 CDD:395320 10/28 (36%)
WW 335..364 CDD:395320 10/28 (36%)
hecw1bXP_021336549.1 HECW_N 73..192 CDD:318711
C2_NEDL1-like 213..349 CDD:176073
WW 771..803 CDD:197736 11/31 (35%)
WW 952..983 CDD:197736 12/30 (40%)
HECTc 1223..1552 CDD:214523
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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