DRSC/TRiP Functional Genomics Resources

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Protein Alignment yki and nedd4l

DIOPT Version :9

Sequence 1:NP_001350857.1 Gene:yki / 37851 FlyBaseID:FBgn0034970 Length:418 Species:Drosophila melanogaster
Sequence 2:XP_012815048.1 Gene:nedd4l / 448382 XenbaseID:XB-GENE-489248 Length:1290 Species:Xenopus tropicalis


Alignment Length:454 Identity:96/454 - (21%)
Similarity:160/454 - (35%) Gaps:168/454 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 EKEIDDEDMLSPIKSNN--------LVVRVNQDTDDNLQALF-------------------DSVL 76
            |:::|:......:..||        .:|.|..::|.|::.:.                   |.:.
 Frog   489 EEKVDNLGRTYYVNHNNKTTQWQRPSLVDVTSESDSNIRHIQQEAHRVFRSRRHISEDLEPDHIE 553

  Fly    77 NPGDAKRPL-----QLPLRMRKLPNSFFTPPAPSHSRANSADSTYDAGSQ---SSINIGNK-ASI 132
            ...|...|.     ::.|....| |....|||...|||::.:.:.:...:   ||.:.|.: :||
 Frog   554 GGADVPEPWETISEEMTLTTDTL-NQSLPPPASPDSRASALELSEELNRRLQISSESNGEQFSSI 617

  Fly   133 VQQPDGQSPIAAIPQLQIQPSPQ--------------HSRL-AIHHSRARSS------------- 169
            :|       .|...|.|.:||.:              |..| ::...|||||             
 Frog   618 IQ-------TAWERQKQREPSTRLRSCSVTDGVAEQAHLSLPSVSTGRARSSTVTGGEDSTPTVA 675

  Fly   170 --------PASLQQ-----------NYNVR-----------ARSDAAAANNPNANPSSQQQPAGP 204
                    |:..::           |:|.|           |...|..:.:.::|..|:.|...|
 Frog   676 YVHTTPGLPSGWEERKDAKGRTYYVNHNNRTTTWTRPIVQHAEDGAVGSTSNSSNHLSEPQIRRP 740

  Fly   205 ----------TFPENSAQEFPSGAPASSAIDLDAMNTCMSQDIPM-SMQTVHKKQRSYDVISPIQ 258
                      :.|...|::|    |...|:.....|....|..|. |.:..||..:|:       
 Frog   741 RSLSSPTVTLSAPLEGAKDF----PVRRAVKDTLSNPQSPQPSPYNSPKPQHKGAQSF------- 794

  Fly   259 LNRQLGALPPGWEQAKTNDGQIYYLNHTTKSTQWEDPRIQYRQQQQILMAERIKQNDVLQTTKQT 323
                   ||||||.....:|:.::::|.||:|.|||||:::                  ....:|
 Frog   795 -------LPPGWEMRIAPNGRPFFIDHNTKTTTWEDPRLKF------------------PVHMRT 834

  Fly   324 TTSTIANNLGPLPDGWEQAVTESGDLYFINHID-------------------RTTSWNDPRMQS 368
            ..|...|:|||||.|||:.:...|..::|:|..                   :.|.|.|||:|:
 Frog   835 KASLNPNDLGPLPPGWEERIHGDGRTFYIDHRSPGLRCRDTGTSCSVPPYDTKITQWEDPRLQN 898

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ykiNP_001350857.1 HUL4 <261..>404 CDD:227354 36/127 (28%)
WW 266..295 CDD:395320 13/28 (46%)
WW 335..364 CDD:395320 10/47 (21%)
nedd4lXP_012815048.1 C2 <389..442 CDD:301316
WW 485..513 CDD:238122 4/23 (17%)
WW 683..712 CDD:278809 4/28 (14%)
WW 796..826 CDD:238122 14/29 (48%)
WW 845..896 CDD:197736 13/50 (26%)
HECTc 933..1287 CDD:238033
HECTc 957..1286 CDD:214523
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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