DRSC/TRiP Functional Genomics Resources

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Protein Alignment yki and kibra

DIOPT Version :9

Sequence 1:NP_001350857.1 Gene:yki / 37851 FlyBaseID:FBgn0034970 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001034055.1 Gene:kibra / 41783 FlyBaseID:FBgn0262127 Length:1288 Species:Drosophila melanogaster


Alignment Length:223 Identity:52/223 - (23%)
Similarity:75/223 - (33%) Gaps:88/223 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 IPQLQIQPSPQHSRLAIHHSRARSSPASLQQNYNVRARSDAAAANNPNANPSSQQQPAGPTFPEN 209
            :|.||...|.....|..||.|    |...||.::             :.:...|||         
  Fly     1 MPNLQQTASQSQHHLHPHHLR----PQQQQQQHH-------------HHHQQQQQQ--------- 39

  Fly   210 SAQEFPSGAPASSAIDLDAMNTCMSQDIPMSMQTVHKKQRSYDVISPIQLNRQLGALPPGWEQAK 274
                                           ..|.|::|:.:....|         ||.||:.||
  Fly    40 -------------------------------QHTHHQQQQQHHSDFP---------LPDGWDIAK 64

  Fly   275 TNDGQIYYLNHTTKSTQWEDPRIQYRQQQQILMAERIKQNDVLQTTKQTTTSTIANNLGPLPDGW 339
            ..||:.||::|..|.|.|.|||..|                   |..||....:.:.   ||.||
  Fly    65 DFDGKTYYIDHINKKTTWLDPRDCY-------------------TKPQTFEDCVGDE---LPMGW 107

  Fly   340 EQAVTESGDLYFINHIDRTTSWNDPRMQ 367
            |::...:...|:|||:.::|...|||.:
  Fly   108 EESYDPNIGPYYINHLAQSTQLEDPRQE 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ykiNP_001350857.1 HUL4 <261..>404 CDD:227354 34/107 (32%)
WW 266..295 CDD:395320 14/28 (50%)
WW 335..364 CDD:395320 10/28 (36%)
kibraNP_001034055.1 WW 57..87 CDD:238122 15/29 (52%)
WW 103..132 CDD:278809 10/28 (36%)
C2_Kibra 693..813 CDD:176062
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4781
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.850

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