DRSC/TRiP Functional Genomics Resources

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Protein Alignment yki and Hace1

DIOPT Version :9

Sequence 1:NP_001350857.1 Gene:yki / 37851 FlyBaseID:FBgn0034970 Length:418 Species:Drosophila melanogaster
Sequence 2:XP_006256657.1 Gene:Hace1 / 361866 RGDID:1306114 Length:916 Species:Rattus norvegicus


Alignment Length:334 Identity:62/334 - (18%)
Similarity:109/334 - (32%) Gaps:109/334 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 QPDGQSPIAAIPQLQIQPSPQHSRLAIHHSR---------ARSSPASLQQNYNVRARSDAAAA-- 188
            |||.        .:..:|..::..|.:|...         ::::.|.|:|...||...:....  
  Rat   546 QPDS--------DMVHRPVSENDILLVHRDSIFRSSCEIVSKANCAKLKQGIAVRFHGEEGMGQG 602

  Fly   189 ---------NNPNANPS---SQQQPAGPTFPENSAQEFPSGAPASSAIDLDAMNTCMSQDIPMSM 241
                     :|...||.   ..|...|.||..||          :|.::.|.:|........:.:
  Rat   603 VVREWFDILSNEIVNPDYALFTQSADGTTFQPNS----------NSYVNPDHLNYFRFAGQILGL 657

  Fly   242 QTVHKK------QRS-YDVISPIQLNRQ-LGALPPGWEQAKTNDGQIYYLNHTTKSTQWEDPRIQ 298
            ...|::      .|| |..|..|.:|.| :.::.|.:                .|:.||      
  Rat   658 ALNHRQLVNIYFTRSFYKHILGIPVNYQDVASIDPEY----------------AKNLQW------ 700

  Fly   299 YRQQQQILMAERIKQNDVLQTTKQTTTSTIANNLG-----PL-PDGWEQAVTESGDLYFINHID- 356
                        |..||:.....:.|.|...:..|     || |.|....||::....::..:. 
  Rat   701 ------------ILDNDISDLGLELTFSVETDVFGAMEEVPLKPGGGSILVTQNNKAEYVQLVTE 753

  Fly   357 -RTTSWNDPRMQS---GLSVLDCPDNLVSSLQIEDN-----LCSNL----FNDAQAIVNPPSSHK 408
             |.|....|::.:   |..:...|    |.:|:.|.     |.|.:    .||........|.::
  Rat   754 LRMTRAIQPQINAFLQGFHMFIPP----SLIQLFDEYELELLLSGMPEIDVNDWIKNTEYTSGYE 814

  Fly   409 PDD--LEWY 415
            .:|  ::|:
  Rat   815 REDPVIQWF 823

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ykiNP_001350857.1 HUL4 <261..>404 CDD:227354 29/163 (18%)
WW 266..295 CDD:395320 4/28 (14%)
WW 335..364 CDD:395320 7/31 (23%)
Hace1XP_006256657.1 ANK repeat 66..95 CDD:293786
ANK 66..93 CDD:197603
Ank_2 69..194 CDD:289560
ANK 92..217 CDD:238125
ANK repeat 97..128 CDD:293786
ANK repeat 130..161 CDD:293786
Ank_2 135..222 CDD:289560
ANK repeat 163..194 CDD:293786
ANK repeat 196..221 CDD:293786
Ank_4 199..249 CDD:290365
HECTc 561..910 CDD:238033 58/311 (19%)
HECTc 586..909 CDD:214523 54/286 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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