DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment yki and Magix

DIOPT Version :9

Sequence 1:NP_001350857.1 Gene:yki / 37851 FlyBaseID:FBgn0034970 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001014131.1 Gene:Magix / 317379 RGDID:1549729 Length:326 Species:Rattus norvegicus


Alignment Length:76 Identity:16/76 - (21%)
Similarity:33/76 - (43%) Gaps:13/76 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 RMRKLPNSFFTPPAPSHSRANSADSTYDAGSQSSINIGNKASI-------VQQPDGQSPIAAIPQ 147
            |.|:|.......|..:.:.|:.:.....||  :::.:.:|.:|       ::..|.:.|.|.:  
  Rat    27 RARQLLERLDARPLAARAAADLSALVRKAG--ATLRLRHKEAISGLDSADIEVADSRLPHATL-- 87

  Fly   148 LQIQPSPQHSR 158
              ::..|||.|
  Rat    88 --VEHRPQHQR 96

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ykiNP_001350857.1 HUL4 <261..>404 CDD:227354
WW 266..295 CDD:395320
WW 335..364 CDD:395320
MagixNP_001014131.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32 2/4 (50%)
PDZ_signaling 127..209 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..267
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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