DRSC/TRiP Functional Genomics Resources

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Protein Alignment yki and Smurf2

DIOPT Version :9

Sequence 1:NP_001350857.1 Gene:yki / 37851 FlyBaseID:FBgn0034970 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001100531.1 Gene:Smurf2 / 303614 RGDID:1310067 Length:748 Species:Rattus norvegicus


Alignment Length:220 Identity:64/220 - (29%)
Similarity:97/220 - (44%) Gaps:38/220 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 PENSAQEFPS-GAPASSAID----LDAMN--TCMSQDIPMSMQTVHKKQRSYDVISPIQLNRQLG 264
            |...|.|:.| |.|.|..:|    :...|  ||.....|...:...:.||..:.:|...|:.. .
  Rat   188 PTRPASEYSSPGRPLSCFVDENTPITGTNGATCGQSSDPRLAERRVRSQRHRNYMSRTHLHTP-P 251

  Fly   265 ALPPGWEQAKTNDGQIYYLNHTTKSTQWEDPRIQYRQQQQILMAERIKQNDVLQTTKQTTTSTIA 329
            .||.|:||..|..||:|:|:..|..:.|.|||:. |....|...|                    
  Rat   252 DLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVP-RDLSNINCEE-------------------- 295

  Fly   330 NNLGPLPDGWEQAVTESGDLYFINHIDRTTSWNDPRMQSGLSVLDCPDNLVSSLQIED--NLCSN 392
              |||||.|||...|.:|.:||::|.:|||.:.|||:.:.|.::....|.:...|.:.  :||. 
  Rat   296 --LGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNRQNQLKDQQQQQVVSLCP- 357

  Fly   393 LFNDAQAIVNPPSSHKPDDLEWYKI 417
              :|.:.:..|  .:|.|.::..||
  Rat   358 --DDTECLTVP--RYKRDLVQKLKI 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ykiNP_001350857.1 HUL4 <261..>404 CDD:227354 43/144 (30%)
WW 266..295 CDD:395320 12/28 (43%)
WW 335..364 CDD:395320 13/28 (46%)
Smurf2NP_001100531.1 C2_Smurf-like 13..137 CDD:176028
PRP40 155..>236 CDD:227435 12/47 (26%)
WW 159..188 CDD:395320 64/220 (29%)
WW 252..283 CDD:197736 13/30 (43%)
WW 298..330 CDD:197736 16/31 (52%)
HECTc 393..745 CDD:238033
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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