DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment yki and Wwc1

DIOPT Version :9

Sequence 1:NP_001350857.1 Gene:yki / 37851 FlyBaseID:FBgn0034970 Length:418 Species:Drosophila melanogaster
Sequence 2:XP_002727807.1 Gene:Wwc1 / 303039 RGDID:1308329 Length:1108 Species:Rattus norvegicus


Alignment Length:103 Identity:38/103 - (36%)
Similarity:55/103 - (53%) Gaps:24/103 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   266 LPPGWEQAKTNDGQIYYLNHTTKSTQWEDPRIQYRQQQQILMAERIKQNDVLQTTKQTTTSTIAN 330
            ||.|||:|:..||::||::|..::|.|.|||.:|                    ||..|.:...:
  Rat     8 LPEGWEEARDFDGKVYYIDHRNRTTSWIDPRDRY--------------------TKPLTFADCIS 52

  Fly   331 NLGPLPDGWEQAV-TESGDLYFINHIDRTTSWNDPRMQ 367
            :  .||.|||:|. .:.|| |||:|..:||...|||:|
  Rat    53 D--ELPLGWEEAYDPQVGD-YFIDHNTKTTQIEDPRVQ 87

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ykiNP_001350857.1 HUL4 <261..>404 CDD:227354 38/103 (37%)
WW 266..295 CDD:395320 13/28 (46%)
WW 335..364 CDD:395320 14/29 (48%)
Wwc1XP_002727807.1 WW 9..39 CDD:238122 14/29 (48%)
WW 55..84 CDD:278809 14/29 (48%)
ALDH-SF 378..>420 CDD:299846
C2_Kibra 661..784 CDD:176062
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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