DRSC/TRiP Functional Genomics Resources

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Protein Alignment yki and Nedd4l

DIOPT Version :10

Sequence 1:NP_001350857.1 Gene:yki / 37851 FlyBaseID:FBgn0034970 Length:418 Species:Drosophila melanogaster
Sequence 2:XP_038952600.1 Gene:Nedd4l / 291553 RGDID:735047 Length:1259 Species:Rattus norvegicus


Alignment Length:341 Identity:75/341 - (21%)
Similarity:131/341 - (38%) Gaps:63/341 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 SPIKSNNLVVRVNQDTDDNLQALFDSVLNPGDAKRPLQLPLRMRKLPNSFFTPPAPSHSRANSAD 113
            ||.:.:..:.|..|.|.|:....|.:::....:.|.....:.......:...||:....||.|  
  Rat   569 SPQELSEELSRRLQITPDSNGEQFSALIQREPSSRLRSCSVTDTVAEQAHLPPPSTPTRRARS-- 631

  Fly   114 STYDAGSQSSINIGNKASIVQQPDGQSPIAAIPQLQIQPSPQHSRLAIHHSRARSSPASLQQNYN 178
            ||...|.:|:.::....:....|.|..        :.:.:...:....|::|..:....:.|...
  Rat   632 STVTGGEESTPSVAYVHTTPGLPSGWE--------ERKDAKGRTYYVNHNNRTTTWTRPIMQLAE 688

  Fly   179 VRARSDAAAANNPNANPSSQ--QQPAGPTFPENSAQEFPSGAPASSAIDLDAMNTCMSQDIPM-S 240
            ..|...|..:||....|..:  :..:.||...::..|....:|...|:.....|....|..|. |
  Rat   689 DGASGSATNSNNHLVEPQIRRPRSLSSPTVTLSAPLEGAKDSPIRRAVKDTLSNPQSPQPSPYNS 753

  Fly   241 MQTVHKKQRSYDVISPIQLNRQLGALPPGWEQAKTNDGQIYYLNHTTKSTQWEDPRIQYRQQQQI 305
            .:..||..:|:              ||||||.....:|:.::::|.||:|.|||||:::    .:
  Rat   754 PKPQHKVTQSF--------------LPPGWEMRIAPNGRPFFIDHNTKTTTWEDPRLKF----PV 800

  Fly   306 LMAERIKQNDVLQTTKQTTTSTIANNLGPLPDGWEQAVTESGDLYFINHI--------------- 355
            .|..:...|              .|:|||||.|||:.:...|..::|:|.               
  Rat   801 HMRSKASLN--------------PNDLGPLPPGWEERIHLDGRTFYIDHSSQVLCGENDTRESVP 851

  Fly   356 ---DRTTSWNDPRMQS 368
               .:.|.|.|||:|:
  Rat   852 LYDSKITQWEDPRLQN 867

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ykiNP_001350857.1 HUL4 <261..>404 CDD:227354 36/126 (29%)
WW 266..295 CDD:459800 13/28 (46%)
WW 335..364 CDD:459800 10/46 (22%)
Nedd4lXP_038952600.1 C2 <365..418 CDD:472691
WW 463..489 CDD:459800
WW 653..682 CDD:459800 4/36 (11%)
WW 766..796 CDD:238122 14/29 (48%)
WW 815..865 CDD:197736 13/49 (27%)
HECTc 926..1255 CDD:214523
Blue background indicates that the domain is not in the aligned region.

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