DRSC/TRiP Functional Genomics Resources

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Protein Alignment yki and oxi-1

DIOPT Version :9

Sequence 1:NP_001350857.1 Gene:yki / 37851 FlyBaseID:FBgn0034970 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_499392.1 Gene:oxi-1 / 176515 WormBaseID:WBGene00003898 Length:1066 Species:Caenorhabditis elegans


Alignment Length:161 Identity:33/161 - (20%)
Similarity:59/161 - (36%) Gaps:42/161 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 QLQIQPSPQHSRLAIHHSRARSSPASLQQNYNVRARSDAAAA----------NNPNANPSSQQQP 201
            ||::..|.:..|....:....:..||.......:...|.:||          :..:|:.||:.:.
 Worm   377 QLKMLWSSRVVRCLFGNIMENTKTASFSVTDGQKNSKDISAAFSKLWRKLGGSTDSASSSSKSES 441

  Fly   202 AGPTFPENSAQEFPSGAPASSAIDLDAMNTCMSQDIPMSMQTVHKKQRSYDVISPI----QLNRQ 262
            ..|          |:.......:.:.|:||           .||.|.   ::||.:    ||.:|
 Worm   442 EPP----------PTLIAIVCQVYMTALNT-----------MVHMKG---EIISGLCRDDQLLKQ 482

  Fly   263 LGALPPGW-EQAKTNDGQIYYLNHTTKSTQW 292
            |......| |:|....|.|:   :::.:.||
 Worm   483 LWTYLREWGEKAGGTSGSIF---NSSNAEQW 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ykiNP_001350857.1 HUL4 <261..>404 CDD:227354 9/33 (27%)
WW 266..295 CDD:395320 7/28 (25%)
WW 335..364 CDD:395320
oxi-1NP_499392.1 HECTc 684..1064 CDD:238033
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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