DRSC/TRiP Functional Genomics Resources

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Protein Alignment yki and hecw-1

DIOPT Version :9

Sequence 1:NP_001350857.1 Gene:yki / 37851 FlyBaseID:FBgn0034970 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001317872.1 Gene:hecw-1 / 175438 WormBaseID:WBGene00009738 Length:1247 Species:Caenorhabditis elegans


Alignment Length:459 Identity:83/459 - (18%)
Similarity:152/459 - (33%) Gaps:153/459 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 RLYTISAFYMLTTMSASSNTNSLIEKEIDDEDMLSPIKSNNLVVRV--NQDTDDNLQ---ALFDS 74
            |:.|:....:.|...:.|.|...:.|     ..:.|..:.|.||:|  |.|..:|..   .|||:
 Worm   367 RMITLRRMDVETDRPSGSETGIFVSK-----SAVYPFGNKNEVVKVWWNIDKPENCLDWIGLFDN 426

  Fly    75 VLNPGDAKRPL-QLPLRMRKLPNSFFTPPAPSHSRANSADSTYD---------AGSQSSINIGNK 129
                .|:...| |..||....|..|   ...|.:..|:::..:.         .....::.|...
 Worm   427 ----NDSSFYLDQKSLRQHISPVVF---TLTSKNLLNASEVYFGLIDGMTGRLLAKSENVEICKS 484

  Fly   130 ASI----VQQPDGQSPIAAIPQLQIQPSPQHSRLAIHHSRARSSP-----ASLQQNYNVRARSDA 185
            ||:    |::|:         .:.:..:..|.|:.|...|:.|..     :|.:.:::|.....:
 Worm   485 ASLVVHEVKKPE---------NINVYLNTNHGRIEIPKKRSFSRKNGSFRSSFEFDFDVEDLHIS 540

  Fly   186 AAANNPNAN-----PSSQQQPAGPTFPENSAQEFPSGAPASSAIDLDAMNTCMSQDIPMSMQTVH 245
            ...|:...|     .|:|.|                    ::.|...:.:.....:|..|::...
 Worm   541 LVENSEKLNFDHFIASNQLQ--------------------NNYIQSKSFSHSHVVEIVFSIEPKT 585

  Fly   246 KKQRSYDVISPIQLNRQLGALPP--GWEQAKTNDGQIYYLNHTTKSTQWEDP------------- 295
            .|:.:.|::. |..:.|   .||  .|:.......:.:|:||.||.|:|..|             
 Worm   586 SKKSAPDIME-IASSSQ---TPPESHWKTYLDAKKRKFYVNHVTKETRWTKPDTLNNNHIEPETP 646

  Fly   296 ----------------------------------RIQYRQQQQILMAERIKQNDVLQTTKQTT-- 324
                                              .||:.|:.:...| ..:..|.:|...:.:  
 Worm   647 VHKRLSDRSASPRNSFITPRRTITVRSAGCPKSDLIQFFQRDEFKTA-LYENQDAMQIYNECSVV 710

  Fly   325 --------------------------TSTIANNLGPLPDGWEQAVTESGDLYFINHIDRTTSWND 363
                                      .:..|:...|||.||| .:|.:....|:||.::.||:.|
 Worm   711 RHAIHRIQKDLDPPSKFENQPLFVRFVNLFADITQPLPSGWE-CITMNNRTVFLNHANKETSFYD 774

  Fly   364 PRMQ 367
            ||::
 Worm   775 PRIR 778

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ykiNP_001350857.1 HUL4 <261..>404 CDD:227354 34/184 (18%)
WW 266..295 CDD:395320 10/30 (33%)
WW 335..364 CDD:395320 11/28 (39%)
hecw-1NP_001317872.1 FBA_2 230..285 CDD:311601
WW 603..634 CDD:197736 10/30 (33%)
WW 746..777 CDD:197736 14/31 (45%)
HECTc 918..1244 CDD:214523
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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