DRSC/TRiP Functional Genomics Resources

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Protein Alignment yki and Plekha5

DIOPT Version :9

Sequence 1:NP_001350857.1 Gene:yki / 37851 FlyBaseID:FBgn0034970 Length:418 Species:Drosophila melanogaster
Sequence 2:XP_006506926.1 Gene:Plekha5 / 109135 MGIID:1923802 Length:1270 Species:Mus musculus


Alignment Length:146 Identity:37/146 - (25%)
Similarity:55/146 - (37%) Gaps:40/146 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   265 ALPPGWEQAKTNDGQIYYLNHTTKSTQWEDPRIQYRQQQQILMAERIKQNDVLQTTKQTTTSTIA 329
            :||..|....|..|:::::|...|||.|..|          :..|.:......|:|         
Mouse    12 SLPRSWTYGITRGGRVFFINEEAKSTTWLHP----------VTGEAVVTGHRRQST--------- 57

  Fly   330 NNLGPLPDGWEQAVTESGDLYFINHIDRTTSWNDPRMQSGLSVLDCPDNLVSSLQIEDNLCSNLF 394
                .||.|||:|.|..|..|:|||.:|..:...|               |:....:|| |..:.
Mouse    58 ----DLPTGWEEAYTFEGARYYINHNERKVTCKHP---------------VTGQPSQDN-CIFVV 102

  Fly   395 NDAQAIVNPPSSHKPD 410
            || |.:....|..|.:
Mouse   103 ND-QTVATMTSEDKKE 117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ykiNP_001350857.1 HUL4 <261..>404 CDD:227354 35/138 (25%)
WW 266..295 CDD:395320 10/28 (36%)
WW 335..364 CDD:395320 13/28 (46%)
Plekha5XP_006506926.1 WW 13..42 CDD:366073 10/28 (36%)
WW 59..88 CDD:366073 13/28 (46%)
PH_PEPP1_2_3 165..268 CDD:270068
Smc <623..>864 CDD:224117
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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