DRSC/TRiP Functional Genomics Resources

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Protein Alignment yki and itcha

DIOPT Version :10

Sequence 1:NP_001350857.1 Gene:yki / 37851 FlyBaseID:FBgn0034970 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001274024.1 Gene:itcha / 100331274 ZFINID:ZDB-GENE-120919-4 Length:851 Species:Danio rerio


Alignment Length:381 Identity:92/381 - (24%)
Similarity:137/381 - (35%) Gaps:122/381 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 EIDDEDMLSPIKSNNLVVRVNQDTDDNLQALFDSVLNPGDAKRPLQLPLRMRKLPNSFFTPPAPS 105
            ::|.|...|..:.:|.||.            .:|.|| |||.|                     |
Zfish   128 QVDAETFASEEQKHNAVVN------------GESRLN-GDAIR---------------------S 158

  Fly   106 HSRANSADSTYDAGSQSSINIGNKASIVQQPDGQSPIAAIPQLQIQPSPQHSRLAIHHSRARSSP 170
            ...:.|:|.|.||...:...:|:.||            |.|......:|:..|      ..|..|
Zfish   159 RDSSPSSDITDDAPLPNGHAVGSSAS------------ASPSTGALRAPRPLR------PQRPPP 205

  Fly   171 ASLQQNYNVRARSDAAAANNPNANPSSQQQPAGPTFPENSAQEFPSGAPASSAIDLDAMNTCMSQ 235
            ||..::.:..|.|..:...:.::.||.:..|......|..:|...||:.::.|            
Zfish   206 ASPHKHTSSTASSTGSTPTHGSSAPSPEMSPRVCVNGETESQGSSSGSGSNQA------------ 258

  Fly   236 DIPMSMQTVHKKQRSYDVISPIQLNRQLGALPPGWEQAKTNDGQIYYLNHTTKSTQWEDP----- 295
              |.:..|..:        :|...|   |.|||||||....:|::||::|..|.|.||.|     
Zfish   259 --PRASPTPPR--------APAITN---GPLPPGWEQRADQNGRVYYVDHIEKRTTWERPEPLPP 310

  Fly   296 ----------RIQY---------------------------RQQQQILMAERIKQNDV--LQTTK 321
                      |:.|                           |.|.|..| :|..|..:  ||...
Zfish   311 GWERRLDPMGRVYYVDHINRTTTWQRPTLESVRNYEEWQNQRSQLQGAM-QRFNQRFIYGLQEQL 374

  Fly   322 QTTTSTIANNLGPLPDGWEQAVTESGDLYFINHIDRTTSWNDPRMQSGLSVLDCPD 377
            ..|.:...:.|||||.|||:....:..:||::|..|:|.|.|||.|..|:....|:
Zfish   375 APTANKEFDPLGPLPSGWEKRTDSNRRMYFVHHPTRSTQWEDPRTQGLLNEKPLPE 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ykiNP_001350857.1 HUL4 <261..>404 CDD:227354 48/161 (30%)
WW 266..295 CDD:459800 15/28 (54%)
WW 335..364 CDD:459800 11/28 (39%)
itchaNP_001274024.1 C2_E3_ubiquitin_ligase 2..125 CDD:175988
WW 276..305 CDD:459800 15/28 (54%)
HUL4 <307..851 CDD:227354 31/125 (25%)
Blue background indicates that the domain is not in the aligned region.

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