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Protein Alignment Rap2l and rap2c
DIOPT Version :9
| Sequence 1: | NP_477402.1 |
Gene: | Rap2l / 37850 |
FlyBaseID: | FBgn0283666 |
Length: | 182 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001016898.1 |
Gene: | rap2c / 549652 |
XenbaseID: | XB-GENE-489027 |
Length: | 183 |
Species: | Xenopus tropicalis |
| Alignment Length: | 183 |
Identity: | 126/183 - (68%) |
| Similarity: | 149/183 - (81%) |
Gaps: | 3/183 - (1%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MREFKVVVLGSGGVGKSALTVQFVSGCFIEKYDPTIEDFYRKEIEVDSSPCVLEILDTAGTEQFA 65
|||:||||||||||||||||||||:|.|||||||||||||||||||||||.||||||||||||||
Frog 1 MREYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFA 65
Fly 66 SMRDLYIKNGHGFIVMYSLTNHQTFQDISSMKNVITRVKGSQPAPILLVANKFDLDCQREVSTAE 130
||||||||||.|||::|||.|.|:||||..|::.|.|||..:..|::||.||.||:.:|||.:||
Frog 66 SMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIVRVKRYEKVPLILVGNKVDLESEREVMSAE 130
Fly 131 GNALAQLWDCPFIEASAKDRINVNEVFATIVREMNLTQENRQKKNYCC--CTL 181
|.:|||.|.|||:|.|||.:..|:|:||.|||:||.. ...:|::.|| ||:
Frog 131 GRSLAQEWGCPFMETSAKSKTMVDELFAEIVRQMNYA-SLPEKQDQCCTTCTV 182
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| Rap2l | NP_477402.1 |
Rap2 |
16..165 |
CDD:133376 |
105/148 (71%) |
| rap2c | NP_001016898.1 |
Rap2 |
3..165 |
CDD:133376 |
117/161 (73%) |
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
0 | 0.000 |
Not matched by this tool. |
| Domainoid |
1 |
1.000 |
235 |
1.000 |
Domainoid score |
I2308 |
| eggNOG |
0 | 0.000 |
Not matched by this tool. |
| Hieranoid |
0 | 0.000 |
Not matched by this tool. |
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
1 |
1.050 |
249 |
1.000 |
Inparanoid score |
I3162 |
| OMA |
1 |
1.010 |
- |
- |
|
QHG48239 |
| OrthoDB |
1 |
1.010 |
- |
- |
|
D1353024at2759 |
| OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000092 |
| OrthoInspector |
1 |
1.000 |
- |
- |
|
otm48097 |
| Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR24070 |
| Phylome |
1 |
0.910 |
- |
- |
|
|
| RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R3491 |
| SonicParanoid |
1 |
1.000 |
- |
- |
|
X266 |
| SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
| TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
10 | 10.110 |
|
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