DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rap2l and CG8500

DIOPT Version :10

Sequence 1:NP_477402.1 Gene:Rap2l / 37850 FlyBaseID:FBgn0283666 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_649948.1 Gene:CG8500 / 41203 FlyBaseID:FBgn0037754 Length:233 Species:Drosophila melanogaster


Alignment Length:184 Identity:74/184 - (40%)
Similarity:113/184 - (61%) Gaps:12/184 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EFKVVVLGSGGVGKSALTVQFVSGCFIEKYDPTIEDFYRKEIEVDSSPCVLEILDTAGTEQFASM 67
            :::|||.|:||||||:|.::|:.|.|.|.|.|||||.||:.|..:.:.|.|:|.||.|:.||.:|
  Fly    18 DYRVVVFGAGGVGKSSLVLRFIKGTFRESYIPTIEDTYRQVISCNKNICTLQITDTTGSHQFPAM 82

  Fly    68 RDLYIKNGHGFIVMYSLTNHQTFQDISSMKNVITRVKGSQ--PAPILLVANKFDLDCQ-REVSTA 129
            :.|.|..||.||::||:.:.|:.:::..:..:|..:||:.  ..|::||.||.|...: ||||.|
  Fly    83 QRLSISKGHAFILVYSVCSKQSLEELRPIWALIKELKGADIPNIPVMLVGNKCDETAELREVSQA 147

  Fly   130 EGNALAQLWDCPFIEASAKDRINVNEVF---------ATIVREMNLTQENRQKK 174
            ||.|.|..|...|:|.|||...||.|:|         .|:..:::..::.:|||
  Fly   148 EGQAQATTWSISFMETSAKTNHNVTELFQELLNMEKTRTVSLQLDTKKQKKQKK 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rap2lNP_477402.1 Rap2 16..165 CDD:133376 63/160 (39%)
CG8500NP_649948.1 ARHI_like 18..183 CDD:206711 70/164 (43%)

Return to query results.
Submit another query.