DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rap2l and Rerg

DIOPT Version :10

Sequence 1:NP_477402.1 Gene:Rap2l / 37850 FlyBaseID:FBgn0283666 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_871788.1 Gene:Rerg / 232441 MGIID:2665139 Length:199 Species:Mus musculus


Alignment Length:163 Identity:66/163 - (40%)
Similarity:100/163 - (61%) Gaps:2/163 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EFKVVVLGSGGVGKSALTVQFVSGCFIEKYDPTIEDFYRKEIEVDSSPCVLEILDTAGTEQFASM 67
            |.|:.:.|..||||||:.|:|::..||.:||||:|..||.:..:|.....:|||||||.|. ...
Mouse     6 EVKLAIFGRAGVGKSAIVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEILDTAGQED-TIQ 69

  Fly    68 RDLYIKNGHGFIVMYSLTNHQTFQDISSMKNVITRVKGSQPAPILLVANKFDLDCQREVSTAEGN 132
            |:.:::.|.||:::|.:|:..:|:::..:||::..||..:...::||.||.|||..|:|||.||.
Mouse    70 REGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEVKKPKNVTLILVGNKADLDHSRQVSTEEGE 134

  Fly   133 ALAQLWDCPFIEASA-KDRINVNEVFATIVREM 164
            .||....|.|.|.|| ....|:.|||..:.||:
Mouse   135 KLATELACAFYECSACTGEGNITEVFYELCREV 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rap2lNP_477402.1 Rap2 16..165 CDD:133376 60/150 (40%)
RergNP_871788.1 RERG_RasL11_like 8..169 CDD:206713 65/161 (40%)

Return to query results.
Submit another query.