Protein Alignment Rap2l and rap-3

DIOPT Version :10

• Sequence 1: NP_477402.1
• Gene: Rap2l / 37850
• FlyBaseID: FBgn0283666
• Length: 182
• Species: Drosophila melanogaster
• Sequence 2: NP_502095.2
• Gene: rap-3 / 182417
• WormBaseID: WBGene00004309
• Length: 205
• Species: Caenorhabditis elegans
• Alignment Length: 200
• Identity: 83/200 - (41%)
• Similarity: 120/200 - (60%)
• Gaps: 19/200 - (9%)

  Fly     1 MREFKVVVLGSGGVGKSALTVQFVSGCFIEKYDPTIEDFYRKEIEVDSSPCVLEILDTAGTEQFA 65
            |:|:|:||||:|||||||||:|:|.|.|:..||.||||.|||..:||:....||||||||||||.
 Worm     1 MKEYKIVVLGNGGVGKSALTLQYVQGIFVHTYDATIEDSYRKLSKVDAENARLEILDTAGTEQFT 65

  Fly    66 SMRDLYIKNGHGFIVMYSLTNHQTFQDISSMKNVITRVKGSQPAPILLVANKFDLDCQREVSTAE 130
            .||:.|.:...||::::||....||:::......|..::|.: .|::||.||.||...|:|..:|
 Worm    66 GMRETYYRTAQGFVLVFSLAETSTFENLKQTFTDIIAIRGKE-VPMILVGNKSDLAETRQVDESE 129

  Fly   131 GNALAQLWDCPFIEASAKDRINVNEVF---ATIVREMNLTQENRQK------------KNY---C 177
            .:..|:....|:.|.||:...||:|||   |.::::.......|:|            ||:   |
 Worm   130 AHNFAEKLKIPYFETSARLNQNVSEVFEECAVLIQKSAKPNIERRKWSSESEIGDKKCKNWLRSC 194

  Fly   178 CCTLL 182
            ||.|:
 Worm   195 CCCLI 199

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rap2l	NP_477402.1	Rap2	16..165	CDD:133376	64/151 (42%)
rap-3	NP_502095.2	small_GTPase	2..166	CDD:197466	74/164 (45%)