DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL39 and GUS1

DIOPT Version :9

Sequence 1:NP_477314.1 Gene:RpL39 / 37849 FlyBaseID:FBgn0023170 Length:51 Species:Drosophila melanogaster
Sequence 2:NP_011269.2 Gene:GUS1 / 852606 SGDID:S000003214 Length:708 Species:Saccharomyces cerevisiae


Alignment Length:42 Identity:13/42 - (30%)
Similarity:22/42 - (52%) Gaps:9/42 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AHKSFRIKQ--KLAKKLKQNRSVPQWVRLRT---GNTIRYNA 39
            |.|...||.  ||::.|:   ::...:.|||   |. ::|:|
Yeast    82 AQKELVIKNFAKLSQSLE---TLDSQLNLRTFILGG-LKYSA 119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL39NP_477314.1 Ribosomal_L39 <20..50 CDD:395670 6/23 (26%)
GUS1NP_011269.2 GST_C_family 72..>128 CDD:413470 13/42 (31%)
gltX_arch 102..696 CDD:273091 6/19 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0008
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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