DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL39 and AT5G19720

DIOPT Version :10

Sequence 1:NP_477314.1 Gene:RpL39 / 37849 FlyBaseID:FBgn0023170 Length:51 Species:Drosophila melanogaster
Sequence 2:NP_197473.1 Gene:AT5G19720 / 832092 AraportID:AT5G19720 Length:170 Species:Arabidopsis thaliana


Alignment Length:13 Identity:6/13 - (46%)
Similarity:8/13 - (61%) Gaps:1/13 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KKLKQNRSVPQWV 27
            ||:|. :.|..||
plant    85 KKIKP-KGVLHWV 96

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL39NP_477314.1 Ribosomal_L39 <20..50 CDD:425894 3/8 (38%)
AT5G19720NP_197473.1 PLN02859 <1..170 CDD:178450 6/13 (46%)

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