DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL39 and AT3G02190

DIOPT Version :9

Sequence 1:NP_477314.1 Gene:RpL39 / 37849 FlyBaseID:FBgn0023170 Length:51 Species:Drosophila melanogaster
Sequence 2:NP_566167.1 Gene:AT3G02190 / 820350 AraportID:AT3G02190 Length:51 Species:Arabidopsis thaliana


Alignment Length:49 Identity:36/49 - (73%)
Similarity:42/49 - (85%) Gaps:0/49 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAAHKSFRIKQKLAKKLKQNRSVPQWVRLRTGNTIRYNAKRRHWRRTKL 49
            |.:||||.||:||.||::|||.:|.|:||||.|.|||||||||||||||
plant     1 MPSHKSFMIKKKLGKKMRQNRPIPNWIRLRTDNKIRYNAKRRHWRRTKL 49

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL39NP_477314.1 Ribosomal_L39 <20..50 CDD:395670 24/30 (80%)
AT3G02190NP_566167.1 Ribosomal_L39 9..50 CDD:395670 31/41 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 76 1.000 Domainoid score I3156
eggNOG 1 0.900 - - E1_COG0008
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 86 1.000 Inparanoid score I2333
OMA 1 1.010 - - QHG54089
OrthoDB 1 1.010 - - D1618745at2759
OrthoFinder 1 1.000 - - FOG0002769
OrthoInspector 1 1.000 - - otm2419
orthoMCL 1 0.900 - - OOG6_101109
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1859
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.740

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