DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL39 and RPL39

DIOPT Version :10

Sequence 1:NP_477314.1 Gene:RpL39 / 37849 FlyBaseID:FBgn0023170 Length:51 Species:Drosophila melanogaster
Sequence 2:NP_000991.1 Gene:RPL39 / 6170 HGNCID:10350 Length:51 Species:Homo sapiens


Alignment Length:42 Identity:12/42 - (28%)
Similarity:20/42 - (47%) Gaps:5/42 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 LESKSTIGVEFATRSIEVD-----GKTIKAQIWDTAGQERYR 74
            ||.::.|.|.|..|..|.:     ...|:.:..:.|.|:|:|
Human   104 LELQTLIDVHFEQRKKEEEELIALKDRIERRRAERAEQQRFR 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL39NP_477314.1 Ribosomal_L39 <20..50 CDD:425894 5/11 (45%)
RPL39NP_000991.1 Ribosomal_L39 10..50 CDD:425894
Blue background indicates that the domain is not in the aligned region.

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