DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL39 and eprs1

DIOPT Version :9

Sequence 1:NP_477314.1 Gene:RpL39 / 37849 FlyBaseID:FBgn0023170 Length:51 Species:Drosophila melanogaster
Sequence 2:XP_009291485.1 Gene:eprs1 / 562037 ZFINID:ZDB-GENE-030131-638 Length:1690 Species:Danio rerio


Alignment Length:31 Identity:9/31 - (29%)
Similarity:15/31 - (48%) Gaps:9/31 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 AKKLKQNRSVP----QWVRLRTGNTIRYNAK 40
            ||.::.:|.:|    ||.     |.:|:..|
Zfish  1309 AKWVQSHRDLPIKLNQWC-----NVVRWEFK 1334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL39NP_477314.1 Ribosomal_L39 <20..50 CDD:395670 7/25 (28%)
eprs1XP_009291485.1 PLN02907 1..717 CDD:215492
GST_C_GluProRS_N 73..153 CDD:198342
tRNA-synt_1c 196..497 CDD:279135
tRNA-synt_1c_C 510..687 CDD:281883
Med25_SD1 716..901 CDD:288132
WEPRS_RNA 762..811 CDD:238473
WHEP-TRS 841..892 CDD:278865
WEPRS_RNA 911..960 CDD:238473
WEPRS_RNA 996..1045 CDD:238473
WHEP-TRS 1080..1132 CDD:278865
PRK08661 1197..1690 CDD:236327 9/31 (29%)
ProRS_core_arch_euk 1201..1464 CDD:238401 9/31 (29%)
ProRS_anticodon_zinc 1470..1690 CDD:238439
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0008
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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