DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpL39 and eprs1

DIOPT Version :10

Sequence 1:NP_477314.1 Gene:RpL39 / 37849 FlyBaseID:FBgn0023170 Length:51 Species:Drosophila melanogaster
Sequence 2:XP_009291485.1 Gene:eprs1 / 562037 ZFINID:ZDB-GENE-030131-638 Length:1690 Species:Danio rerio


Alignment Length:31 Identity:9/31 - (29%)
Similarity:15/31 - (48%) Gaps:9/31 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 AKKLKQNRSVP----QWVRLRTGNTIRYNAK 40
            ||.::.:|.:|    ||.     |.:|:..|
Zfish  1309 AKWVQSHRDLPIKLNQWC-----NVVRWEFK 1334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL39NP_477314.1 Ribosomal_L39 <20..50 CDD:425894 7/25 (28%)
eprs1XP_009291485.1 PLN02907 1..717 CDD:215492
WEPRS_RNA 762..811 CDD:238473
WEPRS_RNA 841..889 CDD:238473
WEPRS_RNA 911..960 CDD:238473
WEPRS_RNA 996..1045 CDD:238473
WEPRS_RNA 1080..1128 CDD:238473
proS_fam_I 1196..1690 CDD:273062 9/31 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.