DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpL39 and ears-2

DIOPT Version :10

Sequence 1:NP_477314.1 Gene:RpL39 / 37849 FlyBaseID:FBgn0023170 Length:51 Species:Drosophila melanogaster
Sequence 2:NP_499917.2 Gene:ears-2 / 176860 WormBaseID:WBGene00001338 Length:481 Species:Caenorhabditis elegans


Alignment Length:10 Identity:5/10 - (50%)
Similarity:7/10 - (70%) Gaps:0/10 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 HKSFRIKQKL 13
            |:..||.|:|
 Worm   471 HRRIRIMQEL 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL39NP_477314.1 Ribosomal_L39 <20..50 CDD:425894
ears-2NP_499917.2 GlnS 8..475 CDD:439779 1/3 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.