DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL39 and GluProRS

DIOPT Version :10

Sequence 1:NP_477314.1 Gene:RpL39 / 37849 FlyBaseID:FBgn0023170 Length:51 Species:Drosophila melanogaster
Sequence 2:XP_311956.5 Gene:GluProRS / 1273018 VectorBaseID:AGAMI1_011795 Length:1813 Species:Anopheles gambiae


Alignment Length:31 Identity:9/31 - (29%)
Similarity:14/31 - (45%) Gaps:9/31 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 AKKLKQNRSVP----QWVRLRTGNTIRYNAK 40
            ||.::..|.:|    ||     .|.:|:..|
Mosquito  1429 AKWIQSYRDLPIRLNQW-----NNVVRWEFK 1454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL39NP_477314.1 Ribosomal_L39 <20..50 CDD:425894 7/25 (28%)
GluProRSXP_311956.5 PLN02907 52..717 CDD:215492
WHEP-TRS 759..806 CDD:459819
WHEP-TRS 828..877 CDD:459819
WHEP-TRS 905..954 CDD:459819
WHEP-TRS 982..1034 CDD:459819
WHEP-TRS 1063..1116 CDD:459819
WHEP-TRS 1135..1184 CDD:459819
WEPRS_RNA 1216..1262 CDD:238473
proS_fam_I 1316..1813 CDD:273062 9/31 (29%)
Blue background indicates that the domain is not in the aligned region.

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