DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL39 and RPL39L

DIOPT Version :9

Sequence 1:NP_477314.1 Gene:RpL39 / 37849 FlyBaseID:FBgn0023170 Length:51 Species:Drosophila melanogaster
Sequence 2:NP_443201.1 Gene:RPL39L / 116832 HGNCID:17094 Length:51 Species:Homo sapiens


Alignment Length:51 Identity:33/51 - (64%)
Similarity:44/51 - (86%) Gaps:0/51 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAAHKSFRIKQKLAKKLKQNRSVPQWVRLRTGNTIRYNAKRRHWRRTKLKL 51
            |::||:|.||:.||||.||||.:|||::::.|:.||||:||||||||||.|
Human     1 MSSHKTFTIKRFLAKKQKQNRPIPQWIQMKPGSKIRYNSKRRHWRRTKLGL 51

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL39NP_477314.1 Ribosomal_L39 <20..50 CDD:395670 19/29 (66%)
RPL39LNP_443201.1 Ribosomal_L39 9..50 CDD:307122 27/40 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 74 1.000 Domainoid score I9135
eggNOG 1 0.900 - - E1_COG0008
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 86 1.000 Inparanoid score I5160
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54089
OrthoDB 1 1.010 - - D1618745at2759
OrthoFinder 1 1.000 - - FOG0002769
OrthoInspector 1 1.000 - - otm42045
orthoMCL 1 0.900 - - OOG6_101109
Panther 1 1.100 - - O PTHR19970
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1859
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1211.880

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