DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpL39 and Eprs

DIOPT Version :9

Sequence 1:NP_477314.1 Gene:RpL39 / 37849 FlyBaseID:FBgn0023170 Length:51 Species:Drosophila melanogaster
Sequence 2:NP_001344403.1 Gene:Eprs / 107508 MGIID:97838 Length:1519 Species:Mus musculus


Alignment Length:31 Identity:9/31 - (29%)
Similarity:15/31 - (48%) Gaps:9/31 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 AKKLKQNRSVP----QWVRLRTGNTIRYNAK 40
            ||.::.:|.:|    ||.     |.:|:..|
Mouse  1138 AKWVQSHRDLPVRLNQWC-----NVVRWEFK 1163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL39NP_477314.1 Ribosomal_L39 <20..50 CDD:395670 7/25 (28%)
EprsNP_001344403.1 GlnS 6..718 CDD:332033
'HIGH' region 204..214
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 294..315
'KMSKS' region 432..436
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 716..749
WEPRS_RNA 760..809 CDD:238473
3 X 57 AA approximate repeats 767..963
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 802..826
WEPRS_RNA 833..882 CDD:238473
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 876..905
WEPRS_RNA 911..959 CDD:238473
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 963..1018
Proline--tRNA ligase 1014..1519 9/31 (29%)
PRK08661 1026..1519 CDD:236327 9/31 (29%)
L-proline binding. /evidence=ECO:0000250|UniProtKB:P07814 1128..1130
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0008
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.