DRSC/TRiP Functional Genomics Resources

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Protein Alignment ppk29 and Asic5

DIOPT Version :10

Sequence 1:NP_001097442.2 Gene:ppk29 / 37844 FlyBaseID:FBgn0034965 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_071563.1 Gene:Asic5 / 63866 RGDID:69295 Length:495 Species:Rattus norvegicus


Alignment Length:520 Identity:108/520 - (20%)
Similarity:171/520 - (32%) Gaps:183/520 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 NFRGFIRSFVENKG----LLWIFV----IGISGWSTVSILVLLKTRYETDSTTIGVSTAYSRWIN 64
            :|.| |.:..:|:.    ::|:.|    :.:..|...|.||    .|....||..:...|...|.
  Rat    46 SFHG-IHNIAQNQNKVRKVIWLSVVLGSVSLLVWQIYSRLV----NYFMWPTTTSIEVQYVEKIE 105

  Fly    65 TFPSIGIC---LTKSRAFNEFKAMMREYFQEDFAFSFTRMIYEYAFLNPNNIFTKEPTKNTSYPY 126
             ||::..|   ..::.|.:.|..:.       |.:.....:.....::.||..:.|.....:...
  Rat   106 -FPAVTFCNLNRFQTEAVSRFGIIF-------FLWDIVSKVLRLQEISGNNTGSPEALDFVASHR 162

  Fly   127 NFNILDIRRKMFPTNCTECFKE--IYFRGELVTDCE--------EIFKFHVTEMGYCFLANNLLD 181
            ||:|            ||..|.  .|...:.:..||        :.||...||.|.||..|...:
  Rat   163 NFSI------------TEFVKNNGFYLNHDTLVHCEFFGKTCDPKDFKHVFTEYGNCFTFNYGEN 215

  Fly   182 YDSIEEMPLRYSSLDNNRSLRLYMRSSVMYKYEMYVNSPEDLPFFNSLTYTISTDPTTYAFNVEE 246
            ..|..::.:      :.|.|:|.:.    ...|.:.::|  :|.|..                  
  Rat   216 VQSKNKVSV------SGRGLKLLLD----VHQEEFTDNP--VPGFAD------------------ 250

  Fly   247 IHNHEGVIDEPISQRKCKFPSESSIEGF----PYSFSACMSI-----IRSEFEMKTCDCSLFNP- 301
                .|||....|.:|     |...:|.    |....|.::|     |..|:....|     || 
  Rat   251 ----AGVIFVIHSPKK-----EPQFDGLGLSSPVGMHARVTIRQLKTIHQEYPWGEC-----NPD 301

  Fly   302 -KDRNESLYCGLQHADCLIKEGFATRVKEYVGSSTVCLP----------------SCVE---QQI 346
             |.||.:.|   ....|| ||..|..::...|    |||                :||.   ..|
  Rat   302 IKLRNFTTY---STYGCL-KECKAKHIQRLCG----CLPFLLPGNGVECDLLKYYNCVSPILDHI 358

  Fly   347 SLVGVITENGTLYNNNTQITEIQIASPPTVRYER------------------------------- 380
            ...|:.| .|| :|::..:...:...|.|:.|..                               
  Rat   359 ERKGLCT-MGT-HNSSCPVPCEETEYPATIAYSTFPSQRATKFLAKKLNQSQEYIRENLVNIEIN 421

  Fly   381 ------KVTQTKL-----DLIVGIGSVAGLFFGASLLNLLEIISY-----------FIKKLKTMI 423
                  |:||.:.     :|:..:|...|||.||||:.::|||.|           |:.|:..||
  Rat   422 YSDLNYKITQQQKAVSVPELLADVGGQLGLFCGASLITIIEIIEYLFTSFYWVFIFFLLKILEMI 486

  Fly   424  423
              Rat   487  486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk29NP_001097442.2 ASC 8..415 CDD:459966 104/510 (20%)
Asic5NP_071563.1 Binds the plasma membrane and stabilizes the channel in the closed state. /evidence=ECO:0000269|PubMed:27679529 1..30
ASC 41..466 CDD:459966 103/498 (21%)
GAS motif, ion selectivity filter. /evidence=ECO:0000250|UniProtKB:P78348 454..456 1/1 (100%)
Blue background indicates that the domain is not in the aligned region.

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