DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk29 and Scnn1a

DIOPT Version :9

Sequence 1:NP_001097442.2 Gene:ppk29 / 37844 FlyBaseID:FBgn0034965 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_113736.1 Gene:Scnn1a / 25122 RGDID:3639 Length:699 Species:Rattus norvegicus


Alignment Length:532 Identity:96/532 - (18%)
Similarity:177/532 - (33%) Gaps:191/532 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LLWIFVIGISGWSTVSILVLLKTRYETDSTTIGVSTAYSRWINTFPSIGICLTKSRAFNEFKAMM 86
            :||:...|:..|.    ..||...|.:...::.::....:.:  ||::.:|......:.|.|..:
  Rat   115 VLWLCTFGMMYWQ----FALLFEEYLSYPVSLNINLNSDKLV--FPAVTVCTLNPYRYTEIKEEL 173

  Fly    87 REY--FQEDFAFSFTRMIYEY--------------------AFLNP-NNIFTKEP------TKNT 122
            .|.  ..|...|.    :|:|                    ||.:| ..:.|..|      .::.
  Rat   174 EELDRITEQTLFD----LYKYNSSYTRQAGARRRSSRDLLGAFPHPLQRLRTPPPPYSGRTARSG 234

  Fly   123 SYPYNFNILDIRRK-------MFPTNCTECFKEIYFRGELVTDCEEIFKFHVTEMGYCFLANNLL 180
            |.....|...:.||       :...|.::||.:.|..|  |....|.::||     |..:.:.|.
  Rat   235 SSSVRDNNPQVDRKDWKIGFQLCNQNKSDCFYQTYSSG--VDAVREWYRFH-----YINILSRLS 292

  Fly   181 DYD-SIEEMPL-------RYSSLDNNRSLRLYMRSSVMYKYEMYVNS------------PEDLPF 225
            |.. ::||..|       |::....|::      :...:.:.||.|.            ...:|.
  Rat   293 DTSPALEEEALGNFIFTCRFNQAPCNQA------NYSKFHHPMYGNCYTFNDKNNSNLWMSSMPG 351

  Fly   226 FNS-LTYTISTDPTTY--------------------AFNVEEIHNHEGVIDEPISQRK------- 262
            .|: |:.|:.|:...:                    ||..:...|....::..||.||       
  Rat   352 VNNGLSLTLRTEQNDFIPLLSTVTGARVMVHGQDEPAFMDDGGFNLRPGVETSISMRKEALDSLG 416

  Fly   263 -----CK-----------FPSESSIEGFPYSFSACMSIIRSEFEMKTCDCS-LFNPKDRNESLYC 310
                 |.           :||:       |:...|:.....|..:|.|.|: :|.||.:      
  Rat   417 GNYGDCTENGSDVPVKNLYPSK-------YTQQVCIHSCFQENMIKKCGCAYIFYPKPK------ 468

  Fly   311 GLQHAD---------CLIKEGFATRVKEYVGSSTVCLPSC----------------------VEQ 344
            |::..|         |..|...|..: :.:|..:.|...|                      :.:
  Rat   469 GVEFCDYRKQSSWGYCYYKLQGAFSL-DSLGCFSKCRKPCSVINYKLSAGYSRWPSVKSQDWIFE 532

  Fly   345 QISLVGVITENGTLYNNNTQITEIQI----------ASPPTVRYERKVTQTKLDLIVGIGSVAGL 399
            .:||    ..|.|:.|....:.::.|          :..|:|        |.:.|:..:||...|
  Rat   533 MLSL----QNNYTINNKRNGVAKLNIFFKELNYKTNSESPSV--------TMVSLLSNLGSQWSL 585

  Fly   400 FFGASLLNLLEI 411
            :||:|:|:::|:
  Rat   586 WFGSSVLSVVEM 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk29NP_001097442.2 ASC 123..415 CDD:279230 74/402 (18%)
Scnn1aNP_113736.1 ENaC 80..677 CDD:273304 96/532 (18%)
deg-1 88..600 CDD:273309 96/532 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345700
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

Return to query results.
Submit another query.