DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk29 and mec-4

DIOPT Version :10

Sequence 1:NP_001097442.2 Gene:ppk29 / 37844 FlyBaseID:FBgn0034965 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_510712.2 Gene:mec-4 / 181728 WormBaseID:WBGene00003168 Length:768 Species:Caenorhabditis elegans


Alignment Length:339 Identity:64/339 - (18%)
Similarity:113/339 - (33%) Gaps:91/339 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 RKMFPTNCTECFKEIYFRGELVTDCEEIFKFHV-TEMGYCFLANNLLDYDSIEEMPLRYSSLDNN 198
            |:...|...|...:..|.|: ..|.|..|..|: ...|.||..|                   :|
 Worm   436 RERLSTTKRELVHKCSFNGK-ACDIEADFLTHIDPAFGSCFTFN-------------------HN 480

  Fly   199 RSLRL-YMRSSVMYKYEM--YVNS------------------PEDLPFFNSLTYTISTD-PTTYA 241
            |::.| .:|:..||...|  |||:                  .||.||.::..|:..|. .:::.
 Worm   481 RTVNLTSIRAGPMYGLRMLVYVNASDYMPTTEATGVRLTIHDKEDFPFPDTFGYSAPTGYVSSFG 545

  Fly   242 FNVEEIHNHEGVIDEPISQRKCKFPSESSIEGFPYSFSACMSIIRSEFEMKTCDCSLFNPK--DR 304
            ..:.::........:.:...|   .|:.....:.||...|......:..:|.|.|.  :|:  ..
 Worm   546 LRLRKMSRLPAPYGDCVPDGK---TSDYIYSNYEYSVEGCYRSCFQQLVLKECRCG--DPRFPVP 605

  Fly   305 NESLYCGLQHADCLIKEGFATRVKEYVG----SSTVCLPSCVEQQISLV---------------- 349
            ..:.:|  ..||.:.::....|:.:..|    ....|...|.:...|:.                
 Worm   606 ENARHC--DAADPIARKCLDARMNDLGGLHGSFRCRCQQPCRQSIYSVTYSPAKWPSLSLQIQLG 668

  Fly   350 ---GVITENGTLYNNNTQITEIQIASPPTVRYER----KVTQTK----LDLIVGIGSVAGLFFGA 403
               |...|....|..|..:.|        |.||:    .:|:::    ::|:...|...||:.|.
 Worm   669 SCNGTAVECNKHYKENGAMVE--------VFYEQLNFEMLTESEAYGFVNLLADFGGQLGLWCGI 725

  Fly   404 SLLNLLEIISYFIK 417
            |.|...|.:..|::
 Worm   726 SFLTCCEFVFLFLE 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk29NP_001097442.2 ASC 8..415 CDD:459966 63/335 (19%)
mec-4NP_510712.2 deg-1 86..736 CDD:273309 63/334 (19%)

Return to query results.
Submit another query.