DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk29 and del-6

DIOPT Version :9

Sequence 1:NP_001097442.2 Gene:ppk29 / 37844 FlyBaseID:FBgn0034965 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_741622.2 Gene:del-6 / 179474 WormBaseID:WBGene00011891 Length:577 Species:Caenorhabditis elegans


Alignment Length:511 Identity:88/511 - (17%)
Similarity:171/511 - (33%) Gaps:141/511 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 WRKSVMNFRGFIRSFVENKGLLWIFVIGISGWSTVSILVLLKTRY-----ETDSTTIGVSTAYSR 61
            |:.::...|....:||        |::......||..:..|...|     |:|     ::..::.
 Worm    31 WKDALFGRRARKYAFV--------FIVAFLAVLTVKDVFDLFEEYFDYPKESD-----INIVFNE 82

  Fly    62 WINTFPSIGICLTKSRAFNEFK-------------------------AMMREYFQEDFAFSFTRM 101
            .: |.|::..|:::.:|::.||                         |.|:..:..........|
 Worm    83 SM-TMPNVTFCMSRQQAWSHFKLNLTAPADEWDAVVDENLANMTDHDAFMKTPWDYRLVMEAYDM 146

  Fly   102 IYEYAFLNPN----------NIFTKEP---TKNTSYPYNFNILDIRRKMFPTNCTECFKEIY--- 150
            |..|:.|...          ::|...|   .|..::....:|||.|...|.....:...|:.   
 Worm   147 IATYSSLERETTAHGSARSIHVFKNAPRLAAKRKTFKKWRDILDSRGITFDEFTQKTGIEVLRRS 211

  Fly   151 ---FRGELVTDCEEIFKFH-----VTEMGYCF----------------------LANNLLDYDSI 185
               ||.....|.|.:.|..     :::|..||                      |::|.   ::.
 Worm   212 MQRFRRRTFDDDETVIKTKLRISWISQMQICFQPEFDQDNFKTIDDQGVFFDMLLSHNA---ENT 273

  Fly   186 EEMPLRYSSLD---NNRSLRLYM----RSSVMYKYEMYVNSPEDLPFFNSLTYTISTDPTTYAFN 243
            |...:...|:|   ...||..:|    ||...|..|:.:....::           |...|..:.
 Worm   274 EGQKIDCMSVDFHGRPSSLNRFMEGKGRSRDGYVDEVCLGQRHEV-----------TAHVTALYQ 327

  Fly   244 VEEIHNHEGVIDEPISQRKCKFPSESSIEGFPYSFSACMSIIRSEFEMKTCDCS------LFNPK 302
            :.| ::.:|.        :|:     .:|....|...|.|..|.|.....|.|:      |...:
 Worm   328 MLE-NDEQGT--------RCR-----DVEDGEDSEFNCRSRCRMEMIRDACHCTPLSLSYLAKKE 378

  Fly   303 DRNESLYCGLQHADCLIKEGFATRVKEYVGSSTVCLPSCVEQQISLVGVITENGTLYNNNTQITE 367
            |......|........:::|..:..:    .:..|.|.|  :||......:..|.:...:..:.|
 Worm   379 DMEIFPLCDYTQCTVDVQKGNYSDTE----CANKCFPDC--RQIRFEVDHSVKGRMLRPDLTLVE 437

  Fly   368 IQIASPPTVRYERKVTQTKLDLIVGIGSVAGLFFGASLLNLLEII----SYFIKKL 419
            :.......:..|::...:....|..:|...|::.|.|:|:|::::    :||.||:
 Worm   438 LSWGPFEYLTMEQQWKYSATSFIAALGGSIGMWLGLSILSLIQLVTYSYTYFTKKI 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk29NP_001097442.2 ASC 123..415 CDD:279230 58/341 (17%)
del-6NP_741622.2 ASC <347..484 CDD:295594 26/142 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.