DRSC/TRiP Functional Genomics Resources

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Protein Alignment sei and CNGC10

DIOPT Version :10

Sequence 1:NP_476713.1 Gene:sei / 37843 FlyBaseID:FBgn0003353 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_001184885.1 Gene:CNGC10 / 838832 AraportID:AT1G01340 Length:711 Species:Arabidopsis thaliana


Alignment Length:737 Identity:152/737 - (20%)
Similarity:266/737 - (36%) Gaps:200/737 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 SYECMFKNLKYNQAEKPTDNVMGNSYDDMLDKEALLGSKSEPKGQDPNDMITS--LGGNIL--LD 300
            |.:.:|||:|:. .:||.                     |.|..:||:...||  ...||:  .|
plant    31 SLDRVFKNVKWG-FKKPL---------------------SFPSHKDPDHKETSSVTRKNIINPQD 73

  Fly   301 QKLQNNYYHKWTLLHYSPFKAVWDWIILILVMYTAIFTPYVAAFLLGEQDYQRRNSKYINSDPIV 365
            ..|||                 |:.|.|...:......|..  |.:...| ..|:...::|...:
plant    74 SFLQN-----------------WNKIFLFACVVALAIDPLF--FYIPIVD-SARHCLTLDSKLEI 118

  Fly   366 IIDL---IVDVTFIVDIIINFRTTF------VNSQDEVVSHPGRIAVHYLSGWFLIDLVAAVPFD 421
            ...|   ::|..:|:.|:..|||.:      |..:.|:|.....||:.|||.:|:|||::.:|..
plant   119 AASLLRTLIDAFYIIHIVFQFRTAYIAPSSRVFGRGELVDDAKAIALKYLSSYFIIDLLSILPLP 183

  Fly   422 LLLVGSDTDETTTLIGLLK------------TARLLRLVRVARKIDRYSEY-------GAAVLIL 467
            .::|.:........:.||.            ..|:||:..:..::.|.|..       |||..:.
plant   184 QIVVLAVIPSVNQPVSLLTKDYLKFSIIAQYVPRILRMYPLYTEVTRTSGIVTETAWAGAAWNLS 248

  Fly   468 LMATFILIAHWLACIWYAIGNAEKSIASKNIGWLNSLAYDIQEPYFDNRTGGPSIK------SRY 526
            |   ::|.:|....:||.|     |:..::..|..:.          .:|.|.::|      .|.
plant   249 L---YMLASHVFGALWYLI-----SVEREDRCWQEAC----------EKTKGCNMKFLYCENDRN 295

  Fly   527 ITALYFT----------FTSLTSVGFGNVAPNTDAEKA--------------------------- 554
            ::..:.|          .|:.|...||..   |||.|:                           
plant   296 VSNNFLTTSCPFLDPGDITNSTIFNFGIF---TDALKSGVVESHDFWKKFFYCFWWGLRNLSALG 357

  Fly   555 -------------FTICVMLVGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVR---EFIRFHQ 603
                         |.|.:.:.|.:::|.:.||:...::   |.|.|.....:|.|   :::....
plant   358 QNLQTSKFVGEIIFAISICISGLVLFALLIGNMQKYLE---STTVREEEMRVRKRDAEQWMSHRM 419

  Fly   604 IPNPLRQRLEEYFQHAWTYTNGIDMNSLLKGFPECLQADICLHLNRKLLTTCAAFSEASPGCLRA 668
            :|..||:|:..|.|:.|..|.|::..:||:..|:.|:.||..||...||.....|.......|.|
plant   420 LPEDLRKRIRRYEQYRWQETRGVEEETLLRNLPKDLRRDIKRHLCLDLLKKVPLFEIMDEQLLDA 484

  Fly   669 FSLKFKTTHAPPGDILVHRGDVLTSLYFIARGSIEIQ-----RAG--NIVVLGKNDIFGENPCIY 726
            ...:.:.........::..||.:..:.|:.||.:...     |:|  |.|.|..:|..||:...:
plant   485 VCDRLRPVLYTENSYVIREGDPVGEMLFVMRGRLVSATTNGGRSGFFNAVNLKASDFCGEDLLPW 549

  Fly   727 PTVGKSNG-------VVRALTYCDIHKLHRDDLLDVLDSYPEFLESFVSNLVITYNMRDDEHSGV 784
            ....:|:.       .|:|||..:...|..:||..|...:.......:.:....|:::....|..
plant   550 ALDPQSSSHFPISTRTVQALTEVEAFALTAEDLKSVASQFRRLHSKQLQHTFRFYSVQWRTWSVS 614

  Fly   785 DIK---HRYLRAKSSDKMRSSPD------------------IPSIRIVGLRYKKQNVNTSVHKVK 828
            .|:   .||.|.|.:..:|...|                  ..|:.:.|..|..:..:.::|.::
plant   615 FIQAAWRRYCRRKLAKSLRDEEDRLREALASQDKEHNAATVSSSLSLGGALYASRFASNALHNLR 679

  Fly   829 NDNSRDLNIFIENEIANYHLDL 850
            ::        |.|....|.|.|
plant   680 HN--------ISNLPPRYTLPL 693

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seiNP_476713.1 Ion_trans 322..583 CDD:459842 66/344 (19%)
CAP_ED 657..767 CDD:237999 25/123 (20%)
CNGC10NP_001184885.1 PLN03192 46..>491 CDD:215625 106/509 (21%)
CAP_ED 473..604 CDD:237999 25/130 (19%)

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