DRSC/TRiP Functional Genomics Resources

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Protein Alignment sei and KT2/3

DIOPT Version :9

Sequence 1:NP_001286814.1 Gene:sei / 37843 FlyBaseID:FBgn0003353 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_567651.1 Gene:KT2/3 / 828311 AraportID:AT4G22200 Length:802 Species:Arabidopsis thaliana


Alignment Length:593 Identity:142/593 - (23%)
Similarity:243/593 - (40%) Gaps:111/593 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   323 WDWIILILVMYTAIFTPYVAAFLLGEQDYQRRNSKYINSDP---IVIIDLIVDVTFIVDIIINFR 384
            |::.:::||.|:|...|:..|||              ||.|   :.|.|.|||:.|.|||::.|.
plant    78 WEFYMVLLVAYSAWVYPFEVAFL--------------NSSPKRNLCIADNIVDLFFAVDIVLTFF 128

  Fly   385 TTFVNSQDE-VVSHPGRIAVHYLSGWFLIDLVAAVPFD---LLLVGSDT-DETTTLIGLLKTARL 444
            ..:::.:.: :|..|.:|||.|||.|||:|:.:.:|||   .|:.|:.| :.|..|:|||:..||
plant   129 VAYIDERTQLLVREPKQIAVRYLSTWFLMDVASTIPFDAIGYLITGTSTLNITCNLLGLLRFWRL 193

  Fly   445 LRLVRVARKID---RYSEYGAAVLILLMATFILIAHWLACIWYAIGNAEKSIASKNIGWLNSLAY 506
            .|:..:..:::   |||.:......||..|..|: |...|.:|.|.:   ....:...|.:::  
plant   194 RRVKHLFTRLEKDIRYSYFWIRCFRLLSVTLFLV-HCAGCSYYLIAD---RYPHQGKTWTDAI-- 252

  Fly   507 DIQEPYFDNRTGGPSIKSRYITALYFTFTSLTSVGFGNVAPNTDAEKAFTICVMLVGSLMYASIF 571
                |.|..    .|:..|||.|:|::.|::|:||:|::..:...|..|....||....:.|.:.
plant   253 ----PNFTE----TSLSIRYIAAIYWSITTMTTVGYGDLHASNTIEMVFITVYMLFNLGLTAYLI 309

  Fly   572 GNVSAIIQRLYSGTARYHTQMLRVREFIRFHQIPNPLRQRLEEY----FQHAWTYTNGIDMNSLL 632
            ||::.::......|..:...:.....|:..:::|..|:.::..|    |:     ...::...|:
plant   310 GNMTNLVVEGTRRTMEFRNSIEAASNFVNRNRLPPRLKDQILAYMCLRFK-----AESLNQQHLI 369

  Fly   633 KGFPECLQADICLHLNRKLLTTCAAFSEASPGCLRAFSLKFKTTHAPPGDILVHRGDVLTSLYFI 697
            ...|:.:...||.||....:.....|...|...|.....|.|..:.||.:.::.:.:....:|.|
plant   370 DQLPKSIYKSICQHLFLPSVEKVYLFKGVSREILLLLVSKMKAEYIPPREDVIMQNEAPDDVYII 434

  Fly   698 ARGSIEI-----QRAGNIVVLGKNDIFGE------NPCIYPTVGKS------------------- 732
            ..|.:||     :|...:..|...|||||      .|..|....||                   
plant   435 VSGEVEIIDSEMERESVLGTLRCGDIFGEVGALCCRPQSYTFQTKSLSQLLRLKTSFLIETMQIK 499

  Fly   733 ---NGVV--------RALTYCDIHKLHRDDLLDVLDSYPEFLESFVSNLVITYNMRDDEHSGVDI 786
               |..:        :.|:..||..|......:..|..|..:.|.:..:|.|.|        ..:
plant   500 QQDNATMLKNFLQHHKKLSNLDIGDLKAQQNGENTDVVPPNIASNLIAVVTTGN--------AAL 556

  Fly   787 KHRYLRAKSSDKMRSSPDIPSIRIVGLR-YK-------KQNVNTSVHKVKNDNSRDLNIFIENEI 843
            ....|:||.|..:..|.....:.:...| |:       |...|..:..| |.||.     :...|
plant   557 LDELLKAKLSPDITDSKGKTPLHVAASRGYEDCVLVLLKHGCNIHIRDV-NGNSA-----LWEAI 615

  Fly   844 ANYHLDLF 851
            .:.|.::|
plant   616 ISKHYEIF 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seiNP_001286814.1 Ion_trans 360..583 CDD:278921 71/233 (30%)
Ion_trans_2 <526..580 CDD:285168 16/53 (30%)
CAP_ED 657..767 CDD:237999 31/150 (21%)
Crp 666..>766 CDD:223736 28/140 (20%)
KT2/3NP_567651.1 PLN03192 23..802 CDD:215625 142/593 (24%)
ANK repeat 574..604 CDD:293786 4/29 (14%)
ANK repeat 606..668 CDD:293786 6/23 (26%)
ANK repeat 670..695 CDD:293786
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 111 1.000 Domainoid score I2073
eggNOG 1 0.900 - - E1_KOG0498
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 129 1.000 Inparanoid score I1888
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm987
orthoMCL 1 0.900 - - OOG6_100845
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X71
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.760

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