DRSC/TRiP Functional Genomics Resources

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Protein Alignment sei and CNGC15

DIOPT Version :10

Sequence 1:NP_476713.1 Gene:sei / 37843 FlyBaseID:FBgn0003353 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_180393.1 Gene:CNGC15 / 817372 AraportID:AT2G28260 Length:678 Species:Arabidopsis thaliana


Alignment Length:202 Identity:42/202 - (20%)
Similarity:64/202 - (31%) Gaps:68/202 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 MAALYYDN--KFCC----GGSL-----LSDRYVITAAH-------------------CTTKP--- 156
            |..||.::  .|.|    |||.     ..|.:...|||                   |..:.   
plant    60 MTLLYPESWKMFKCQLRQGGSTGYDTRREDSFTFAAAHYNYNAEIWKSIENEWRKTQCIPREVCV 124

  Fly   157 DRGLFRVQFG--INDRSKPIATSIERSVKRILTNWYNAFNNNNDI---ALLELTYPVAISDRVMP 216
            |.|   .:||  .|...||...|:.|......:...:..|.::..   .|.|:|.|:: ...|.|
plant   125 DVG---KEFGAPTNTFFKPPCVSVYRCGGCCNSEGLHCMNTSSTFVSKTLFEITVPLS-QGPVKP 185

  Fly   217 ICLPQAT----------EMYEGSRGIVTGWGRTKAGGGLSGTLMQTEVPILTNRECRRAGYWAFQ 271
            :.:..|.          ::|.....|:.        ..|..|.:|.:|   .|:.|.|...|   
plant   186 VTISFANHTSCRCMSKLDVYRQVHSIIR--------RSLPATQLQCQV---ANKTCPRNHIW--- 236

  Fly   272 ITNKMLC 278
              |..:|
plant   237 --NNHVC 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seiNP_476713.1 Ion_trans 322..583 CDD:459842
CAP_ED 657..767 CDD:237999
CNGC15NP_180393.1 PLN03192 127..>489 CDD:215625 28/135 (21%)
CAP_ED 471..602 CDD:237999
Blue background indicates that the domain is not in the aligned region.

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