DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sei and SPIK

DIOPT Version :9

Sequence 1:NP_001286814.1 Gene:sei / 37843 FlyBaseID:FBgn0003353 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_180131.3 Gene:SPIK / 817099 AraportID:AT2G25600 Length:888 Species:Arabidopsis thaliana


Alignment Length:568 Identity:127/568 - (22%)
Similarity:242/568 - (42%) Gaps:85/568 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 DMLDKEALLGSKSEPKGQDPNDMITSLGGNILLDQKLQNNYYHKWTLLHYSPFKAVWDWIILILV 331
            |.|.::..:...|..||     ::.|||.|   ::..::....::.:..:.|....|:..::.||
plant    35 DHLSRDGTMSQYSLSKG-----LLPSLGAN---NRSSRDVILPRFIVSPFDPRYRAWETFLVFLV 91

  Fly   332 MYTAIFTPYVAAFLLGEQDYQRRNSKYINSDPIVIIDLIVDVTFIVDIIINFRTTFVNSQDEV-- 394
            :|||..:|:...||...:            .|:.|:|.||:..|.|||::.|   ||...|:|  
plant    92 LYTAWASPFEFGFLQKPR------------PPLSILDNIVNGFFAVDIVLTF---FVAFLDKVTY 141

  Fly   395 --VSHPGRIAVHYLSGWFLIDLVAAVPFDLLLVGSDTDETTTLIGLLKTARLLRLVRVA------ 451
              |..|.|||..|.|.|.:.|:|:..|:::.  ||...|:....|:....||.||.||:      
plant   142 LLVDDPKRIAWRYASTWLIFDVVSTFPYEIF--GSLLHESIQGYGIFSMLRLWRLRRVSNCFARL 204

  Fly   452 RKIDRYSEYGAAVLILLMATFILIAHWLACIWYAIG-----NAEKSIASKNIGWLNSLAYDIQEP 511
            .|..:||.:......||:.|..:| |..||..|:|.     .::..:|..:..|..|        
plant   205 EKDRKYSYFWVRCSKLLLVTLFVI-HCGACFLYSIAAHYPDPSKTFMALTDENWKES-------- 260

  Fly   512 YFDNRTGGPSIKSRYITALYFTFTSLTSVGFGNVAPNTDAEKAFTICVMLVGSLMYASIFGNVSA 576
                     .|..||.||:|::.|:.::.|:|::......|..|.:..|:....:.|.|.||::.
plant   261 ---------PIAVRYNTAMYWSITTFSTTGYGDIHGVNSREMTFILFYMVFNLGLSAYIIGNMTN 316

  Fly   577 IIQRLYSGTARYHTQMLRVREFIRFHQIPNPLRQRLEEYFQHAW-TYTNGIDMNSLLKGFPECLQ 640
            ::..:...|.::...:.....|.:.:.:|..|:.::..:....: |.:.|:....::...|:.::
plant   317 LVVHVTGRTRKFRDTIQAASGFGQRNNLPVRLQDQMVAHLCLRYRTDSEGLQQQEIIDSLPKAIR 381

  Fly   641 ADICLHLNRKLLTTCAAFSEASPGCLRAFSLKFKTTHAPPGDILVHRGDVLTSLYFIARGSIEIQ 705
            :.|..:|..:::.....|...|...|.....:.|..:.||.:.::.:.:..|..|.:..|:::|.
plant   382 SSISHYLFYEVVDKIYLFHGISNDLLFQLVTEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDII 446

  Fly   706 RAGN-----IVVLGKNDIFGENP--CIYPTVGKSNGVVRALTYCDIHKLHRDDLLDVLDSYPEFL 763
            ...|     :....:..:|||..  |..|.:    ..||......:.:|:|..||:::.:.....
plant   447 ARVNGVEQVVSEAQRGHVFGEVGVLCYRPQL----FTVRTKRLSQLLRLNRTVLLNLVQANVGDG 507

  Fly   764 ESFVSNLVITYNMRDDEH---SGV--DIKHRYLRAKSSDKMRSSPDIP 806
            ...::||:  .:::|.|.   .||  |.:|...:.|.        |:|
plant   508 AIIMNNLL--QHLKDSEDPVMKGVLADTEHMLAQGKM--------DLP 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seiNP_001286814.1 Ion_trans 360..583 CDD:278921 66/237 (28%)
Ion_trans_2 <526..580 CDD:285168 14/53 (26%)
CAP_ED 657..767 CDD:237999 22/116 (19%)
Crp 666..>766 CDD:223736 20/106 (19%)
SPIKNP_180131.3 PLN03192 38..888 CDD:215625 125/565 (22%)
ANK repeat 548..574 CDD:293786
ANK repeat 576..607 CDD:293786
ANK repeat 609..671 CDD:293786
ANK repeat 673..704 CDD:293786
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 111 1.000 Domainoid score I2073
eggNOG 1 0.900 - - E1_KOG0498
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 129 1.000 Inparanoid score I1888
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm987
orthoMCL 1 0.900 - - OOG6_100845
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X71
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.760

Return to query results.
Submit another query.