DRSC/TRiP Functional Genomics Resources

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Protein Alignment sei and cnga1b

DIOPT Version :9

Sequence 1:NP_001286814.1 Gene:sei / 37843 FlyBaseID:FBgn0003353 Length:855 Species:Drosophila melanogaster
Sequence 2:XP_701036.4 Gene:cnga1b / 572249 ZFINID:ZDB-GENE-110408-39 Length:639 Species:Danio rerio


Alignment Length:660 Identity:154/660 - (23%)
Similarity:267/660 - (40%) Gaps:154/660 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 NNKRECLKKVKPMKGENAVETNGIPLESKPSQHKKQKSFKKCIKCDKKKLYIKNYQVSARRECDL 218
            ||:.|..||.|..|           .|.|..:.||:|..||    :|||                
Zfish    46 NNEEEDKKKKKKEK-----------KEKKEKKEKKEKKEKK----EKKK---------------- 79

  Fly   219 LCSYDPLRKNNADLFQTHKGTSYECMFKNLKYNQAEKPTDNVMGNSYDDMLDKEALLGSKSEPKG 283
                                            .|.||..:.......:...:||.   .|.||..
Zfish    80 --------------------------------EQEEKEKEKEKEKEKEKEKEKEK---EKKEPLK 109

  Fly   284 Q----DPNDMITSLGGNILLDQKLQNNYYHKWTLLHYSPFKAVWDWIILILVMYTAIFTPYVAAF 344
            :    ||       .||:         ||:             |.::|...|||..||....|.|
Zfish   110 EIEVVDP-------AGNM---------YYN-------------WLFVITCPVMYNWIFIIARACF 145

  Fly   345 LLGEQDYQRRNSKYINSDPIVI---IDLIVDVTFIVDIIINFRTTFVNSQDEVVSHPGRIAVHYL 406
                        :.:..|.:::   :|.:.|..:::|::...||.:: .|..:|....::...|.
Zfish   146 ------------EELQGDYLILWFFLDYLSDAVYLLDMVFRTRTGYL-EQGLLVKDQKKLRDRYT 197

  Fly   407 -SGWFLIDLVAAVPFDL--LLVGSDTDETTTLIGLLKTARLLRLVRVARKIDRYSEYGAAVLIL- 467
             |..|.:||.:.||.|:  |..|.:..|    |.:.|..|:.||....::.:..:.:.....|. 
Zfish   198 DSLQFRLDLASMVPTDIFYLYFGMNYPE----IRMNKLLRINRLFEFFQRTETRTNFPNVFRISN 258

  Fly   468 LMATFILIAHWLACIWYAIGNAEKSIASKNIGW-LNSLAY-DIQEPYFDNRTGGPSIKSRYITAL 530
            |:...::|.||.||::|:.        ||.||: .::..| |..:|.|..      :..:|..::
Zfish   259 LVMYIVIIIHWNACMYYSF--------SKAIGFGSDAFVYPDPSDPEFGR------LVRKYAYSM 309

  Fly   531 YFTFTSLTSVGFGNVAPNTDAEKAFTICVMLVGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRV 595
            |::..:||::| ....|..::|..|.:...|||.|::|:|.|||.::|....:..|.:..::..:
Zfish   310 YWSTLTLTTIG-ETPPPVENSEYFFVVTDFLVGVLIFATIVGNVGSMITNANAARADFQARIDAI 373

  Fly   596 REFIRFHQIPNPLRQRLEEYFQHAWTYTNGIDMNSLLKGFPECLQADICLHLNRKLLTTCAAFSE 660
            ::::.|.::...|.:|:.::|.:.||....:|...:||..|:.|:|:|.::::...|.....|::
Zfish   374 KQYMSFRKVTKDLEKRVIKWFDYLWTNKKAVDEREVLKYLPDKLRAEIAINVHLDTLKKVRIFAD 438

  Fly   661 ASPGCLRAFSLKFKTTHAPPGDILVHRGDVLTSLYFIARGSIEIQRAGNI---VVLGKNDIFGEN 722
            ...|.|....||.:.....|||.:..:||:...:|.|..|.:.:.....|   |||.....||| 
Zfish   439 CEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGE- 502

  Fly   723 PCIYPTVGKSNG-----VVRALTYCDIHKLHRDDLLDVLDSYPE---FLESFVSNLVITYNMRDD 779
            ..|....|...|     .:|::.|.|:..|.:|||::.|..||:   .||.....:::..|:.|.
Zfish   503 ISILNIKGSRAGNRRTANIRSIGYSDLFCLSKDDLMEALTEYPDAKAMLEEKGRQILMKDNLLDL 567

  Fly   780 E--HSGVDIK 787
            |  ..|.|.|
Zfish   568 ELAKQGPDPK 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seiNP_001286814.1 Ion_trans 360..583 CDD:278921 58/231 (25%)
Ion_trans_2 <526..580 CDD:285168 18/53 (34%)
CAP_ED 657..767 CDD:237999 35/120 (29%)
Crp 666..>766 CDD:223736 33/110 (30%)
cnga1bXP_701036.4 Ion_trans 151..363 CDD:278921 58/231 (25%)
Crp 429..629 CDD:223736 42/150 (28%)
CAP_ED 435..551 CDD:237999 33/116 (28%)
CLZ 551..621 CDD:293134 8/27 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578346
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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