DRSC/TRiP Functional Genomics Resources

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Protein Alignment sei and LOC562466

DIOPT Version :9

Sequence 1:NP_001286814.1 Gene:sei / 37843 FlyBaseID:FBgn0003353 Length:855 Species:Drosophila melanogaster
Sequence 2:XP_009295831.2 Gene:LOC562466 / 562466 -ID:- Length:801 Species:Danio rerio


Alignment Length:769 Identity:156/769 - (20%)
Similarity:262/769 - (34%) Gaps:212/769 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 DNAAKKPPVKEFKRNCPAKSNKFVERELFSLMCNLNKIEKKQVFVSDILINASMFDDKKESLARF 97
            |.|.::|| :|.|...|...::.::..|..::..|.  ::.:.|...::      |....|..|.
Zfish   136 DPANEQPP-EEGKEPRPILISEEIDTHLIEMIQKLR--QRTEQFKEKVI------DPYASSPERS 191

  Fly    98 PKNVSDHNTLVYHKFLRTRP-TNDDEALKLKAGGKSKERPGTKITADCFFSPLLFKINNKRECLK 161
            |..........|:|.:..|. ..::|.::.:...|.||....|...:.        ...|:|..:
Zfish   192 PPVTPVLRKDDYYKLVEERKRQEEEERIRKEEEKKRKEEEAKKKKEEA--------EKKKKEEEE 248

  Fly   162 KVKPMKGENAVETNGIPLESKPSQHKKQKS-FKKCIKCDKKKLYIKNYQVSARRECDLLCSYDPL 225
            |.|..:.|...|..|.|:|.|..:..::|| |.|                               
Zfish   249 KKKKEEEEKKKEQAGKPVEKKDDKTDEKKSIFSK------------------------------- 282

  Fly   226 RKNNADLFQTHKGTSYECMFKNLKYNQAEKPTDNVMGNSYDDMLDKEALLGSKSEPKGQDPNDMI 290
                         .::.|:...||  ..|...||.:|.|.|...|:..:                
Zfish   283 -------------VNFTCVDFVLK--PFEMRMDNRIGKSIDPFTDRRYI---------------- 316

  Fly   291 TSLGGNILLDQKLQNNYYHKWTLLHYSPFKAVWDWIILILVMYTAIFTPYVAAFLLGEQDYQRRN 355
                                           .|..::.|...|...|.|...||           
Zfish   317 -------------------------------TWLSMVTIAFNYNLWFVPVRMAF----------- 339

  Fly   356 SKYINSDPIVI---IDLIVDVTFIVDII-INFRTTFVNSQD-----EVVSHPGRIAVHYLSGWFL 411
             .|.:.:.:.:   :|:|.|..:|.|:| ...|..|....|     ||:....|     .||.|.
Zfish   340 -PYHSPEVVPLWFTLDIIADFIYIFDMIFFQPRLQFSKGGDIIYDREVIKKKYR-----ESGRFQ 398

  Fly   412 IDLVAAVPFDLLLVGSDTDETTTLIGLLKTARLLRLVRVARKIDRYSEYGAAVLILLMATFI--- 473
            .|::|.:|.|||.:.         .|.....||.||:    |::.:.|:...:..||...:|   
Zfish   399 NDVIAVLPIDLLYIP---------FGFNSVFRLNRLM----KVESFFEFSDRLEGLLTRAYIWRV 450

  Fly   474 --------LIAHWLACIWYAIGNAEKSIASKNIGWLNSLAYDIQEPYFDNRTGGPSIKSRYITAL 530
                    .|.|..||::| :.:..:.|.|..  |:.|               |..  |.|::..
Zfish   451 IRTIGYLLFILHLNACLYY-VASVSQGIGSTK--WVYS---------------GKG--SAYLSCF 495

  Fly   531 YFTFTSLTSVG---FGNVAPNTDAEKAFTICVMLVGSLMYASIFGNVSAIIQRLYSGTARYHTQM 592
            ::...||..:.   |    |.|...:.|.:....||:|..:.|...:..:|....:|...:...|
Zfish   496 FYAEKSLLMIAELPF----PETMFGQIFQMTNYFVGALFLSIILAQMRDVIGAATAGQTYFRASM 556

  Fly   593 LRVREFIRFHQIPNPLRQRLEEYFQHAWTYTNGIDMNSLLKGFPECLQADICLHLNRKLLTTCAA 657
            .....::..:.||..::.|:..::.:.|.....:|.:.||...|..::..|.:.:|      .|.
Zfish   557 DACVAYMVTNHIPKMVQSRVRTWYNYTWDSQGMLDESELLGQMPLVMRTAIAVDIN------LAT 615

  Fly   658 FS--EASPGC----LRAFSLKFKTTHAPPGDILVHRGDVLTSLYFIARGSIEIQRAGN------I 710
            |.  |...||    |....|:.|:....|||.:|.:||:...:|.|..|  |:|..|.      .
Zfish   616 FQKIELFKGCDNQMLVDMLLRLKSIVYLPGDFVVKKGDIGKEMYIIKAG--EVQVIGGPDNKIVF 678

  Fly   711 VVLGKNDIFGENPCIYPTVGKSN---GVVRALTYCDIHKLHRDDLLDVLDSYPE 761
            |.|....:|||...:..:....|   ..|.|..:.::..|.:.||.|:|..|||
Zfish   679 VTLKAGCVFGEISLLQSSANGGNRRTANVAAHGFANLFVLDKKDLNDILIHYPE 732

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seiNP_001286814.1 Ion_trans 360..583 CDD:278921 54/245 (22%)
Ion_trans_2 <526..580 CDD:285168 12/56 (21%)
CAP_ED 657..767 CDD:237999 35/120 (29%)
Crp 666..>766 CDD:223736 31/105 (30%)
LOC562466XP_009295831.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578301
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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