DRSC/TRiP Functional Genomics Resources

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Protein Alignment sei and CG6026

DIOPT Version :9

Sequence 1:NP_001286814.1 Gene:sei / 37843 FlyBaseID:FBgn0003353 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_650778.2 Gene:CG6026 / 42287 FlyBaseID:FBgn0038676 Length:1555 Species:Drosophila melanogaster


Alignment Length:153 Identity:37/153 - (24%)
Similarity:53/153 - (34%) Gaps:38/153 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 PLRKNNADLFQTHKGTSYECMFKNLKYNQAEKP----TDNVMGNSYDDMLDKEALLGSKSEPKGQ 284
            ||...:||:.......|...:..|..:|:. ||    .|.|.|     .||..|...:..:|:..
  Fly    37 PLEARSADVSGEEDVISTSYVLPNQIFNEG-KPYYARQDPVSG-----QLDFSAKKPAGIQPEAN 95

  Fly   285 ---DPNDMITSLGGNILLDQKLQNNYYHKWTL-LHYSPFKAVWDWIILILVMYTAIFTPYVAAFL 345
               |||:.|...||:       ..|.:....| :.||..|.|          |..:.:.|     
  Fly    96 EVLDPNEKIVLSGGS-------SPNIHDFLNLPVKYSSSKFV----------YPLVSSSY----- 138

  Fly   346 LGEQDYQRRNSKYI-NSDPIVII 367
             ....||..|..|| |..|..::
  Fly   139 -ANLKYQGSNKNYITNKKPTSVV 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seiNP_001286814.1 Ion_trans 360..583 CDD:278921 2/8 (25%)
Ion_trans_2 <526..580 CDD:285168
CAP_ED 657..767 CDD:237999
Crp 666..>766 CDD:223736
CG6026NP_650778.2 PHA03378 <792..975 CDD:223065
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445372
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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