DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sei and eag

DIOPT Version :10

Sequence 1:NP_476713.1 Gene:sei / 37843 FlyBaseID:FBgn0003353 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_001036275.1 Gene:eag / 32428 FlyBaseID:FBgn0000535 Length:1270 Species:Drosophila melanogaster


Alignment Length:827 Identity:299/827 - (36%)
Similarity:426/827 - (51%) Gaps:145/827 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 KRNCPAKSNKFVERELFSLMCNLNKIEKKQVFVSDILINASMFDDK----KESLARFPKNVSDHN 105
            :|...|..|.|:|        |:.:....|...|.:|.||.:.|..    .||..:    :|.:|
  Fly     5 RRGLVAPQNTFLE--------NIIRRSNSQPDSSFLLANAQIVDFPIVYCNESFCK----ISGYN 57

  Fly   106 TL-VYHK-------FLRTRPTNDDEALKLKAGGKSKERPGTKITADCFFSPLLFKINNKRECLKK 162
            .. |..|       |:....|:.:...:|:...:::::..        |..||:|.|| .:|   
  Fly    58 RAEVMQKSCRYVCGFMYGELTDKETVGRLEYTLENQQQDQ--------FEILLYKKNN-LQC--- 110

  Fly   163 VKPMKGENAVETNGIPLESKPSQHKKQKSFKKCIKCDKKKLYIKNYQVSARRECDLLCSYDPLRK 227
                         |..|    ||..|.::       .:..|:             ||....|:| 
  Fly   111 -------------GCAL----SQFGKAQT-------QETPLW-------------LLLQVAPIR- 137

  Fly   228 NNADLFQTHKGTSYECMFKN---LKYNQAEKPTDNVMGNSYDDMLDK--------EALLGSKSEP 281
            |..||.     ..:...|::   ||.....:.|..|:|.|....|.:        .|.|.:..:|
  Fly   138 NERDLV-----VLFLLTFRDITALKQPIDSEDTKGVLGLSKFAKLARSVTRSRQFSAHLPTLKDP 197

  Fly   282 KGQDPNDMITSLGGNILLDQKLQNNYYHKWTLLHYSPFKAVWDWIILILVMYTAIFTPYVAAFLL 346
            ..|.....:.||..:|:...:.:........||||..|||:|||:||.|..||||..||..||  
  Fly   198 TKQSNLAHMMSLSADIMPQYRQEAPKTPPHILLHYCAFKAIWDWVILCLTFYTAIMVPYNVAF-- 260

  Fly   347 GEQDYQRRNSKYINSDPIVIIDLIVDVTFIVDIIINFRTTFVNSQDEVVSHPGRIAVHYLSGWFL 411
                 :.:.|:.::   ::::|.||||.|.:||::||.||||....||||.|..|.::||..||:
  Fly   261 -----KNKTSEDVS---LLVVDSIVDVIFFIDIVLNFHTTFVGPGGEVVSDPKVIRMNYLKSWFI 317

  Fly   412 IDLVAAVPFDLL-LVGSDTDETTTLIGLLKTARLLRLVRVARKIDRYSEYGAAVLILLMATFILI 475
            |||::.:|:|:. ....|.|...:|...||..|||||.||.||:|||.|||||:||||:..::|:
  Fly   318 IDLLSCLPYDVFNAFDRDEDGIGSLFSALKVVRLLRLGRVVRKLDRYLEYGAAMLILLLCFYMLV 382

  Fly   476 AHWLACIWYAIGNAEKSIASKNI--GWLNSLAYDIQEPY---FDNRTG-----GPSIKSRYITAL 530
            |||||||||:||   :|.|...|  .||..||...|.||   :.|.||     |||.||.|:|||
  Fly   383 AHWLACIWYSIG---RSDADNGIQYSWLWKLANVTQSPYSYIWSNDTGPELVNGPSRKSMYVTAL 444

  Fly   531 YFTFTSLTSVGFGNVAPNTDAEKAFTICVMLVGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRV 595
            |||.|.:|||||||||..||.||.||||:|::.:|:||:|||:|:.|||::.|.||:||..:..|
  Fly   445 YFTMTCMTSVGFGNVAAETDNEKVFTICMMIIAALLYATIFGHVTTIIQQMTSATAKYHDMLNNV 509

  Fly   596 REFIRFHQIPNPLRQRLEEYFQHAWTYTNGIDMNSLLKGFPECLQADICLHLNRKLLTTCAAFSE 660
            |||::.|::|..|.:|:.:|....|..|.|:|...:|...|:.::||||:|||||:.....||..
  Fly   510 REFMKLHEVPKALSERVMDYVVSTWAMTKGLDTEKVLNYCPKDMKADICVHLNRKVFNEHPAFRL 574

  Fly   661 ASPGCLRAFSLKFKTTHAPPGDILVHRGDVLTSLYFIARGSIEIQRAGNIV-VLGKNDIFGENPC 724
            ||.|||||.::.|..:|:.|||:|.|.|:.:.||.||..||:|:.:...:| :|||.|:||:...
  Fly   575 ASDGCLRALAMHFMMSHSAPGDLLYHTGESIDSLCFIVTGSLEVIQDDEVVAILGKGDVFGDQFW 639

  Fly   725 IYPTVGKSNGVVRALTYCDIHKLHRDDLLDVLDSYPEFLESFVSNLVITYNMRDDEHSGVDIKHR 789
            ....||:|...||||||||:|.:.||.||:|||.|..|..||..|||:|||:|          ||
  Fly   640 KDSAVGQSAANVRALTYCDLHAIKRDKLLEVLDFYSAFANSFARNLVLTYNLR----------HR 694

  Fly   790 YLRAKSSD---------KMRSSPDIPSIRIVGLRYKKQNVNTSVHKV 827
            .:..|.:|         :.::.|.:|           ||.:..|.|:
  Fly   695 LIFRKVADVKREKELAERRKNEPQLP-----------QNQDHLVRKI 730

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seiNP_476713.1 Ion_trans 322..583 CDD:459842 136/271 (50%)
CAP_ED 657..767 CDD:237999 53/110 (48%)
eagNP_001036275.1 PAS_9 40..155 CDD:463873 31/173 (18%)
Ion_trans 238..499 CDD:459842 137/273 (50%)
CAP_ED 571..682 CDD:237999 53/110 (48%)

Return to query results.
Submit another query.