DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sei and CNGA1

DIOPT Version :9

Sequence 1:NP_001286814.1 Gene:sei / 37843 FlyBaseID:FBgn0003353 Length:855 Species:Drosophila melanogaster
Sequence 2:XP_005248106.2 Gene:CNGA1 / 1259 HGNCID:2148 Length:765 Species:Homo sapiens


Alignment Length:862 Identity:184/862 - (21%)
Similarity:339/862 - (39%) Gaps:220/862 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 QQCELYMSNNNIN--DNAAKKPPV------KEFKRNCPAKSNKFVERELFSLMCNLNKIEKKQVF 76
            |..:|.|.||.||  .:....|.|      ||.:|......:.|.|                   
Human    74 QDMKLSMKNNIINTQQSFVTMPNVIVPDIEKEIRRMENGACSSFSE------------------- 119

  Fly    77 VSDILINASMFDDKKESLARFPKNVSDHNTLVY-HKFLRTRPTNDDEALKLKAGGKSKER--PGT 138
                       ||...|.:...:|.:.|....: :|.||            |.|...:|:  || 
Human   120 -----------DDDSASTSEESENENPHARGSFSYKSLR------------KGGPSQREQYLPG- 160

  Fly   139 KITADCFFSPLLFKINNKRECLKKVKPMKGENAVETNGIPLESKPSQHKKQKSFKKCIKCDKKKL 203
                    :..||.:||...                    .:.:|.:.||:|..||....||.: 
Human   161 --------AIALFNVNNSSN--------------------KDQEPEEKKKKKKEKKSKSDDKNE- 196

  Fly   204 YIKNYQVSARRECDLLCSYDPLRKNNADLFQTHKGTSYECMFKNLKYNQAEKPTDNVMGNSYDDM 268
             .||               ||.:|                  |..|..:.:|             
Human   197 -NKN---------------DPEKK------------------KKKKDKEKKK------------- 214

  Fly   269 LDKEALLGSKSEPKGQDPNDMITSLGGNILLDQKLQNNYYHKWTLLHYSPFKAVWDWIILILVMY 333
              ||    .||:.|.::....:      :::|.. .|.||:             |.:.|.:.|||
Human   215 --KE----EKSKDKKEEEKKEV------VVIDPS-GNTYYN-------------WLFCITLPVMY 253

  Fly   334 TAIFTPYVAAFLLGEQDYQRRNSKYINSDPI---VIIDLIVDVTFIVDIIINFRTTFVNSQDEVV 395
            .  :|..:|.....|          :.||.:   :|:|.:.|:.:::|:.:..||.:: .|..:|
Human   254 N--WTMVIARACFDE----------LQSDYLEYWLILDYVSDIVYLIDMFVRTRTGYL-EQGLLV 305

  Fly   396 SHPGRIAVHYLSG-WFLIDLVAAVPFDLLL--VGSDTDETTTLIGLLKTARLLRLVRVARKIDRY 457
            ....::...|.|. .|.:|:::.:|.|||.  :|.:..|          .||.||:|.:|..:.:
Human   306 KEELKLINKYKSNLQFKLDVLSLIPTDLLYFKLGWNYPE----------IRLNRLLRFSRMFEFF 360

  Fly   458 ------SEYGAAVLIL-LMATFILIAHWLACIWYAIGNAEKSIASKNIGWLNSLAYDIQEPYFDN 515
                  :.|.....|. |:...::|.||.||::|:|   .|:|...|..|:..   ||.:|.|..
Human   361 QRTETRTNYPNIFRISNLVMYIVIIIHWNACVFYSI---SKAIGFGNDTWVYP---DINDPEFGR 419

  Fly   516 RTGGPSIKSRYITALYFTFTSLTSVGFGNVAPNTDAEKAFTICVMLVGSLMYASIFGNVSAIIQR 580
                  :..:|:.:||::..:||::| ....|..|:|..|.:...|:|.|::|:|.||:.::|..
Human   420 ------LARKYVYSLYWSTLTLTTIG-ETPPPVRDSEYVFVVVDFLIGVLIFATIVGNIGSMISN 477

  Fly   581 LYSGTARYHTQMLRVREFIRFHQIPNPLRQRLEEYFQHAWTYTNGIDMNSLLKGFPECLQADICL 645
            :.:..|.:..::..:::::.|..:...:.:|:.::|.:.||....:|...:||..|:.|:|:|.:
Human   478 MNAARAEFQARIDAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKTVDEKEVLKYLPDKLRAEIAI 542

  Fly   646 HLNRKLLTTCAAFSEASPGCLRAFSLKFKTTHAPPGDILVHRGDVLTSLYFIARGSIEIQRAGNI 710
            :::...|.....|::...|.|....||.:.....|||.:..:||:...:|.|..|.:.:.....:
Human   543 NVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGV 607

  Fly   711 ---VVLGKNDIFGENPCIYPTVGKS----NGVVRALTYCDIHKLHRDDLLDVLDSYPE---FLES 765
               |||.....|||...:.....|:    ...::::.|.|:..|.:|||::.|..||:   .||.
Human   608 TQFVVLSDGSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKTMLEE 672

  Fly   766 FVSNLVITYNMRD--DEHSGVDIKHRYLRAKSSDKMRSSPDIPSIRIVGLRYKKQNVNTSVHKVK 828
            ....:::...:.|  ..::|.|.|.  |..|.: :|..|.|:...|...:..:.:::...:.:..
Human   673 KGKQILMKDGLLDLNIANAGSDPKD--LEEKVT-RMEGSVDLLQTRFARILAEYESMQQKLKQRL 734

  Fly   829 NDNSRDLNIFIENEIAN 845
            ....:.|...|:.|.::
Human   735 TKVEKFLKPLIDTEFSS 751

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seiNP_001286814.1 Ion_trans 360..583 CDD:278921 62/235 (26%)
Ion_trans_2 <526..580 CDD:285168 18/53 (34%)
CAP_ED 657..767 CDD:237999 31/119 (26%)
Crp 666..>766 CDD:223736 29/109 (27%)
CNGA1XP_005248106.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165145043
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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