DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sei and LOC101883600

DIOPT Version :10

Sequence 1:NP_476713.1 Gene:sei / 37843 FlyBaseID:FBgn0003353 Length:855 Species:Drosophila melanogaster
Sequence 2:XP_073769333.1 Gene:LOC101883600 / 101883600 -ID:- Length:1135 Species:Danio rerio


Alignment Length:687 Identity:379/687 - (55%)
Similarity:489/687 - (71%) Gaps:44/687 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 IPLE-SKPSQ--HKKQKSFKKCIKCDKKKLYIKNYQVSARRECDLLCSYDPLRKNNADLFQTHKG 238
            :||: |.|.|  |:...:..:...|..:.  :....|.:||....:...:.|..|:..|: |.:.
Zfish   236 VPLDHSSPRQTWHRPGAAQTQSSSCLAQA--VSRDSVCSRRRASSVHDIEGLSANHKRLY-TDRH 297

  Fly   239 TSYECMFKNLKYNQAEKPTDN------------VMGNSYDDMLDKEALLGSKSE-----PKGQDP 286
            || |..|.:||.:.....:|:            ::..::.:..|::|.....||     ||.:|.
Zfish   298 TS-EGPFNHLKSSLLGSTSDSNLNKYSTINKIPLIALNFSEANDRKAPSPPSSEKTIIAPKVKDR 361

  Fly   287 NDMIT-------SLGGNILLDQKLQNNYYHKWTLLHYSPFKAVWDWIILILVMYTAIFTPYVAAF 344
            ...:|       |||.::|.:.|||:....|:|:||||||||||||:||:||:||||||||.|||
Zfish   362 THCVTEKVTQVLSLGADVLPEYKLQSPRMDKFTILHYSPFKAVWDWLILLLVIYTAIFTPYTAAF 426

  Fly   345 LLGEQDYQRRNSKYINSDPIVIIDLIVDVTFIVDIIINFRTTFVNSQDEVVSHPGRIAVHYLSGW 409
            ||..::.:|:...| :..|:.::||:||:.||:||:||||||:||..:|||||||:||:||..||
Zfish   427 LLDREEQKRQECGY-SCSPLNVVDLMVDIMFIIDILINFRTTYVNLNEEVVSHPGKIAIHYFKGW 490

  Fly   410 FLIDLVAAVPFDLLLVGSDTDETTTLIGLLKTARLLRLVRVARKIDRYSEYGAAVLILLMATFIL 474
            ||||:|||||||||:.||.:|:||||||||||||||||||||||:|||||||||||:|||..|.|
Zfish   491 FLIDMVAAVPFDLLIFGSGSDDTTTLIGLLKTARLLRLVRVARKLDRYSEYGAAVLMLLMCIFAL 555

  Fly   475 IAHWLACIWYAIGNAEKSIASKNIGWLNSLAYDIQEPYFDNRTG-GPSIKSRYITALYFTFTSLT 538
            ||||||||||||||.|||.....||||::|...|.:....:..| |||||.:|:|||||||:|||
Zfish   556 IAHWLACIWYAIGNVEKSYLEHKIGWLDNLEVSIGKRSNTSDPGSGPSIKDKYVTALYFTFSSLT 620

  Fly   539 SVGFGNVAPNTDAEKAFTICVMLVGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVREFIRFHQ 603
            |||||||:|||::||.|:|||||:|||||||||||||||||||||||||||.|||||:|||||||
Zfish   621 SVGFGNVSPNTNSEKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHMQMLRVKEFIRFHQ 685

  Fly   604 IPNPLRQRLEEYFQHAWTYTNGIDMNSLLKGFPECLQADICLHLNRKLLTTCAAFSEASPGCLRA 668
            |||||||||||||||:||||||||||.:|||||||||||||||||..||..|.||..|:.|||||
Zfish   686 IPNPLRQRLEEYFQHSWTYTNGIDMNMVLKGFPECLQADICLHLNDSLLQGCKAFRGATQGCLRA 750

  Fly   669 FSLKFKTTHAPPGDILVHRGDVLTSLYFIARGSIEIQRAGNIV-VLGKNDIFGENPCIYPTVGKS 732
            .:::||.|||||||.|||.|||||:|||::||||||.:...:| :|||||||||...:|...|||
Zfish   751 LAIRFKNTHAPPGDTLVHCGDVLTALYFLSRGSIEILKDDIVVAILGKNDIFGEMIHLYAKPGKS 815

  Fly   733 NGVVRALTYCDIHKLHRDDLLDVLDSYPEFLESFVSNLVITYNMRDDEHSGVDIKHRYLRAKSSD 797
            |..||||:|||:|.:.|::||:|||.||||.:.|::||.:|:|:|||     :.|..|.::..||
Zfish   816 NADVRALSYCDLHTIQREELLEVLDMYPEFADYFLTNLELTFNLRDD-----NTKATYSQSSDSD 875

  Fly   798 KMRSSPDIPSIRIVGLRYKKQNVNTSVHKVKNDNSRD 834
                ..:..|.|.:.:: :|.:...|:.:..:::.|:
Zfish   876 ----GEENKSRRKISVK-RKSSQGGSLREADSESRRE 907

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seiNP_476713.1 Ion_trans 322..583 CDD:459842 184/261 (70%)
CAP_ED 657..767 CDD:237999 67/110 (61%)
LOC101883600XP_073769333.1 None

Return to query results.
Submit another query.