DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sei and LOC100334711

DIOPT Version :9

Sequence 1:NP_001286814.1 Gene:sei / 37843 FlyBaseID:FBgn0003353 Length:855 Species:Drosophila melanogaster
Sequence 2:XP_002660423.1 Gene:LOC100334711 / 100334711 -ID:- Length:718 Species:Danio rerio


Alignment Length:716 Identity:170/716 - (23%)
Similarity:290/716 - (40%) Gaps:160/716 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 KKVKPMKGENAVETNGIPLESKPSQHKKQKSFKKCIKCDKKKLYIKNYQVSARRECDLLCSYDPL 225
            ||.:|.|.|...|...   |.|..:..::|..||..|.|:||                       
Zfish   126 KKEEPKKDEKKEEKKD---EKKDEKKDEKKDEKKDEKKDEKK----------------------- 164

  Fly   226 RKNNADLFQTHKGTSYECMFKNLKYNQAEKPTDNVMGNSYDDMLDKEALLGSKSEPKGQDPNDMI 290
                                        ::..|....:..||...:|      .:||.....|..
Zfish   165 ----------------------------DEKKDEKKDDKKDDKKKEE------EKPKHVWIMDPA 195

  Fly   291 TSLGGNILLDQKLQNNYYHKWTLLHYSPFKAVWDWIILILVMYTAIFTPYVAAFLLGEQDYQRRN 355
            |.|             |||             |..|:.|.|.|..:.....|.|...:.||    
Zfish   196 TDL-------------YYH-------------WLTIVAIPVFYNLMLLVTRACFNELQDDY---- 230

  Fly   356 SKYINSDPIVIIDLIVDVTFIVDIIINFRTTFVNSQDEVVSHPGRIAVHY-LSGWFLIDLVAAVP 419
                 :...:::|...||.:.:|..:..||.|: .|..:|....::..|| .|..|..|:.:.:|
Zfish   231 -----TILWMVLDYTSDVIYYLDTFVRSRTGFL-EQGLLVRESKKLWEHYKKSPQFKFDIFSMIP 289

  Fly   420 FDLLL--VGSDTDETTTLIGLLKTARLLRLVRVARKIDRYSE-------YGAAVLILLMATFILI 475
            .|:|:  ||.:..|       |:..||.::.|:....||...       :..:.|:|.:   ::|
Zfish   290 TDILMLKVGYNNPE-------LRFNRLFKMARLFEYFDRTETRTNFPNIFRISNLVLYI---LII 344

  Fly   476 AHWLACIWYAIGNAEKSIASKNIGW-LNSLAY-DIQEPYFDNRTGGPSIKSRYITALYFTFTSLT 538
            .||..||::||        ||.:|: .:|..| :|.:|.| .|.|     .:||..||::..:||
Zfish   345 IHWNGCIFFAI--------SKTLGFGSDSWVYPNISDPEF-GRLG-----RKYIYCLYWSTLTLT 395

  Fly   539 SVGFGNVAPNTDAEKAFTICVMLVGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVREFIRFHQ 603
            ::| ....|..|.|..|.:...|:|.|::|:|.|||.|:|..:.:..|.:..::..::::::|.:
Zfish   396 TIG-ETPPPVRDIEYFFVVSDFLIGVLIFATIVGNVGAMISNMNASRAEFQAKIDSIKQYMQFRK 459

  Fly   604 IPNPLRQRLEEYFQHAWTYTNGIDMNSLLKGFPECLQADICLHLNRKLLTTCAAFSEASPGCLRA 668
            :...|..|:.::|.:.||.....|...:||..|:.|:|:|.::::.:.|.....|.:...|.|..
Zfish   460 VSKDLEARVVKWFDYLWTEQKTCDEKEVLKYLPDKLKAEIAINVHLETLRKVRIFQDCEAGLLVE 524

  Fly   669 FSLKFKTTHAPPGDILVHRGDVLTSLYFIARGSIEIQRAGNI---VVLGKNDIFGENPCIYPTVG 730
            ..||.:.....|||.:..:||:...:|.|..|.:.:.....:   |||.....||| ..|....|
Zfish   525 LVLKLQPQVFSPGDYICKKGDIGREMYIIKEGKLAVVADDGVTQFVVLSDGAYFGE-ISILGIKG 588

  Fly   731 KSNG-----VVRALTYCDIHKLHRDDLLDVLDSYPE---FLESFVSNLVITYNMRDD--EHSGVD 785
            ...|     .:|::.|.|:..|.:|||:|.|..|||   .||.....:::..|:.|:  .::|.|
Zfish   589 SKAGNRRTANIRSVGYSDLFALSKDDLMDALSEYPEAKKALEEKGRAILMKDNLIDEAAANAGAD 653

  Fly   786 IKHRYLRAKSSDKMRSSPDIPSIRIVGL---------RYKKQNVNTSVHKVKNDNSRDLNIFIEN 841
            .|.  |..| .:.:.::.|:...:...|         |.|::..|... :||.....||:..:|:
Zfish   654 AKD--LEEK-VNLLGTNLDVMQTKFARLMADWTASQSRIKQRLTNMEA-RVKTLREEDLDEVVED 714

  Fly   842 E 842
            :
Zfish   715 K 715

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seiNP_001286814.1 Ion_trans 360..583 CDD:278921 66/234 (28%)
Ion_trans_2 <526..580 CDD:285168 21/53 (40%)
CAP_ED 657..767 CDD:237999 36/120 (30%)
Crp 666..>766 CDD:223736 34/110 (31%)
LOC100334711XP_002660423.1 Ion_trans 228..441 CDD:278921 68/247 (28%)
Crp 507..697 CDD:223736 49/193 (25%)
CAP_ED 513..629 CDD:237999 34/116 (29%)
CLZ 629..699 CDD:293134 14/73 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.