DRSC/TRiP Functional Genomics Resources

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Protein Alignment sei and LOC100334297

DIOPT Version :9

Sequence 1:NP_001286814.1 Gene:sei / 37843 FlyBaseID:FBgn0003353 Length:855 Species:Drosophila melanogaster
Sequence 2:XP_017208463.1 Gene:LOC100334297 / 100334297 -ID:- Length:908 Species:Danio rerio


Alignment Length:625 Identity:160/625 - (25%)
Similarity:274/625 - (43%) Gaps:102/625 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 SYDPLRKNNAD---LFQTHKGTSYECMFKNLKYNQAEKPTDNVMGNSYDDMLDKEALLG-----S 277
            |:...::..||   :||..     :.:.||...:|..|...|.:|...|   .:||::|     :
Zfish     7 SFSSNKEEKADGNNVFQRQ-----DSILKNSMGSQNMKDHGNSVGGKGD---REEAMVGFDDIDA 63

  Fly   278 KSEPKG---------QDPNDMITSL---GGNILLD---QKLQNNYYHKWTLLHYSPFKAVWDWII 327
            .|...|         ..|.....||   |....::   :::|...|  |.:..||.|:..||.|:
Zfish    64 ASRQYGFMQRQFGAMMQPGVNKFSLRMFGSQKAVEKEQERVQTAGY--WIIHPYSDFRFYWDLIM 126

  Fly   328 LILVMYTAIFTPYVAAFLLGEQDYQRRNSKYINSDPIVIIDLIVDVTFIVDIIINFRTTFVNSQ- 391
            ||::|...|..| |......||          .:...::.::..|..|:||:::||||..||.: 
Zfish   127 LIMMMGNLIIIP-VGITFFSEQ----------TTTSWLVFNVASDTIFLVDLVMNFRTGIVNEES 180

  Fly   392 DEVVSHPGRIAVHYLSGWFLIDLVAAVPFDLLLV----GSDTDETTTLIGL--------LKTARL 444
            .|::..|..|.::||..||::|.::::|.|.:.:    |.|::...|...|        |...||
Zfish   181 SEIILDPKVIKMNYLKSWFVVDFLSSIPVDYIFLIVEKGFDSEVYKTARALRIVRFTKILSLLRL 245

  Fly   445 LRLVRVARKIDRYSE-----YGAAVLIL----LMATFILIAHWLACIWYAIGNAEKSIASKNIGW 500
            |||.|:.|.|.::.|     |..|..::    |:...:|:.||..|:.:.:              
Zfish   246 LRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFLV-------------- 296

  Fly   501 LNSLAYDIQEPYFDNRTG--GPSIKSRYITALYFTFTSLTSVGFGNVAPNTDAEKAFTICVMLVG 563
              .|..|.....:.:..|  ..|...:|..||:...:.:..:|:|..||.:.::...|:..|:||
Zfish   297 --PLLQDFPPDCWVSLNGMVNDSWGKQYSYALFKAMSHMLCIGYGARAPVSMSDLWITMLSMIVG 359

  Fly   564 SLMYASIFGNVSAIIQRLYSGTARYHTQMLRVREFIRFHQIPNPLRQRLEEYFQHAWTYTNGI-D 627
            :..||...|:.:|:||.|.|...:|..:..:|.:::.||::|..:||::.:|::|  .|...| |
Zfish   360 ATCYAMFVGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQKIHDYYEH--RYQGKIFD 422

  Fly   628 MNSLLKGFPECLQADICLHLNRKLLTTCAAFSEASPGCLRAFSLKFKTTHAPPGDILVHRGDVLT 692
            .:|:|....:.|:.:|.....|||:.|...|:.|.|..:.....|.|.....|.|.::..|.|..
Zfish   423 EDSILNELNDPLKEEIVNFNCRKLVATMPLFANADPNFVTGMLSKLKFEVFQPNDYIIREGTVGK 487

  Fly   693 SLYFIARG-SIEIQRAGNIVVLGKNDIFGENPCIYPTVGKSNGVVRALTYCDIHKLHRDDLLDVL 756
            .:|||..| :..|.:....:.|.....||| .|:. |.|:....|||.|||.:..|..|...:||
Zfish   488 KMYFIQHGVASVITKFNKELKLTDGSYFGE-ICLL-TKGRRTASVRADTYCRLFSLSVDHFNEVL 550

  Fly   757 DSYPEFLESFVS------------NLVITYNMRDDEHSGV 784
            :.||....:|.:            |.::....:.|.::||
Zfish   551 EEYPMMRRAFETVAIDRLDRIGKKNSLLLQKFQKDLNAGV 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seiNP_001286814.1 Ion_trans 360..583 CDD:278921 63/246 (26%)
Ion_trans_2 <526..580 CDD:285168 16/53 (30%)
CAP_ED 657..767 CDD:237999 33/110 (30%)
Crp 666..>766 CDD:223736 30/100 (30%)
LOC100334297XP_017208463.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578331
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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