DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaSnap1 and NAPG

DIOPT Version :9

Sequence 1:NP_477469.1 Gene:gammaSnap1 / 37842 FlyBaseID:FBgn0028552 Length:302 Species:Drosophila melanogaster
Sequence 2:XP_011524056.1 Gene:NAPG / 8774 HGNCID:7642 Length:372 Species:Homo sapiens


Alignment Length:310 Identity:118/310 - (38%)
Similarity:186/310 - (60%) Gaps:20/310 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IAEAEDLVKQAEKSLKLSMLKWVPDYDSAADEYSKAATAYRIAKSYDKSKECFLKAIDAYKNNKS 73
            |...|..||:. .|||...|||.|||||||.||.|||.|::.||.::::|:..|:...|::||::
Human    67 IDSLEKKVKRT-NSLKTGFLKWKPDYDSAASEYGKAAVAFKNAKQFEQAKDACLREAVAHENNRA 130

  Fly    74 WFHAAKAYEQIILLSKDADKLHEVEEYANKSASLYQQHGSPEAAASALDKAAKLTESKHPDMALR 138
            .|||||||||..::.|:..||.|..:...|::.:|.::|:|:.||.||::|.||.|:..|:.|::
Human   131 LFHAAKAYEQAGMMLKEMQKLPEAVQLIEKASMMYLENGTPDTAAMALERAGKLIENVDPEKAVQ 195

  Fly   139 FYQHALEVIMIEDSVRQAAEYASKVSRILVKLRRYDEATNALKKEISLNQQTESYGQIGRLVVAL 203
            .||....|...|:.:|||.|...|.||:||:.||:|||..:::||.::.::.|:|....:..:|.
Human   196 LYQQTANVFENEERLRQAVELLGKASRLLVRGRRFDEAALSIQKEKNIYKEIENYPTCYKKTIAQ 260

  Fly   204 VMVQLARGDSVEAEKTFREWGNCCEP-----EEVSTLQTLLQAFDDEDPELAARMLASPFIRHMD 263
            |:|.|.|.|.|.||:..||  :...|     |:.:.|:.||:.:|.:|.:..:.:..||..::||
Human   261 VLVHLHRNDYVAAERCVRE--SYSIPGFNGSEDCAALEQLLEGYDQQDQDQVSDVCNSPLFKYMD 323

  Fly   264 VEYAILSKNIPLPQGIQMEKKA---------GDTAAETNDAEDE--GGLC 302
            .:||.|..::.:|.| .::||:         |.||...::.|||  ||||
Human   324 NDYAKLGLSLVVPGG-GIKKKSPATPQAKPDGVTATAADEEEDEYSGGLC 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaSnap1NP_477469.1 SNAP 11..248 CDD:305195 96/241 (40%)
TPR repeat 33..70 CDD:276937 17/36 (47%)
TPR repeat 74..111 CDD:276937 15/36 (42%)
TPR repeat 114..149 CDD:276937 14/34 (41%)
TPR repeat 153..187 CDD:276937 16/33 (48%)
NAPGXP_011524056.1 SNAP 71..338 CDD:276937 104/269 (39%)
TPR repeat 90..127 CDD:276937 17/36 (47%)
TPR repeat 131..168 CDD:276937 15/36 (42%)
TPR repeat 171..206 CDD:276937 14/34 (41%)
TPR repeat 210..246 CDD:276937 16/35 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159302
Domainoid 1 1.000 180 1.000 Domainoid score I3515
eggNOG 1 0.900 - - E1_KOG1585
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2838
Inparanoid 1 1.050 211 1.000 Inparanoid score I3662
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55184
OrthoDB 1 1.010 - - D1540214at2759
OrthoFinder 1 1.000 - - FOG0003744
OrthoInspector 1 1.000 - - otm40472
orthoMCL 1 0.900 - - OOG6_103437
Panther 1 1.100 - - LDO PTHR13768
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4330
SonicParanoid 1 1.000 - - X4180
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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