DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gammaSnap1 and gammaSnap1

DIOPT Version :10

Sequence 1:NP_477469.1 Gene:gammaSnap1 / 37842 FlyBaseID:FBgn0028552 Length:302 Species:Drosophila melanogaster
Sequence 2:XP_315648.5 Gene:gammaSnap1 / 1276317 VectorBaseID:AGAMI1_012908 Length:322 Species:Anopheles gambiae


Alignment Length:321 Identity:173/321 - (53%)
Similarity:235/321 - (73%) Gaps:24/321 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 AKKIAEAEDLVKQAEKSLKLSMLKWVPDYDSAADEYSKAATAYRIAKSYDKSKECFLKAIDAYKN 70
            :.||.||::.::||||.||.|:|||.||:|:||:||:||||.:|.|||.|:.::|.:|:.|.::.
Mosquito     2 SSKIEEAQEHIRQAEKCLKTSLLKWRPDFDNAAEEYNKAATCFRNAKSLDQCRDCLMKSADCHRQ 66

  Fly    71 NKSWFHAAKAYEQIILLSKDADKLHEVEEYANKSASLYQQHGSPEAAASALDKAAKLTESKHPDM 135
            |::.|||||..:|.||:.|:.:.|.::.:.|.::.:|||||||||:.|:.||||||:.|..||:.
Mosquito    67 NRALFHAAKCLDQAILICKEMNNLGDIRKLAERACNLYQQHGSPESGATVLDKAAKILEQTHPED 131

  Fly   136 ALRFYQHALEVIMIEDSVRQAAEYASKVSRILVKLRRYDEATNALKKEISLNQQTESYGQIGRLV 200
            ||:.|:.|::|:.||||.||.|||||||:||:|||..||:|.:|:::||.|:||..|.|.||||.
Mosquito   132 ALQLYKQAVDVVTIEDSTRQGAEYASKVARIMVKLGMYDQAADAIRREIGLHQQVGSEGAIGRLA 196

  Fly   201 VALVMVQLARGDSVEAEKTFREWGNCCEPEEVSTLQTLLQAFDDEDPELAARMLASPFIRHMDVE 265
            ||||:|||||||.|.|||.|:||||||:..||.||::||||:||||||||.|.|:||||||||||
Mosquito   197 VALVLVQLARGDYVAAEKAFKEWGNCCDAAEVQTLESLLQAYDDEDPELAQRALSSPFIRHMDVE 261

  Fly   266 YAILSKNIPLPQGIQMEKK------------------AGDTAAET------NDAEDEGGLC 302
            ||.|::::|||:|:.:..|                  |||.||:.      .|.|||||||
Mosquito   262 YARLARDLPLPKGVSIAPKANVIENAAASYVSPNSGAAGDAAAKPAAGPAGGDDEDEGGLC 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaSnap1NP_477469.1 SNAP 11..248 CDD:451671 134/236 (57%)
TPR repeat 33..70 CDD:276937 18/36 (50%)
TPR repeat 74..111 CDD:276937 14/36 (39%)
TPR repeat 114..149 CDD:276937 17/34 (50%)
TPR repeat 153..187 CDD:276937 20/33 (61%)
gammaSnap1XP_315648.5 None

Return to query results.
Submit another query.