DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaSnap1 and Napg

DIOPT Version :10

Sequence 1:NP_477469.1 Gene:gammaSnap1 / 37842 FlyBaseID:FBgn0028552 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_001406305.1 Gene:Napg / 108123 MGIID:104561 Length:362 Species:Mus musculus


Alignment Length:367 Identity:122/367 - (33%)
Similarity:194/367 - (52%) Gaps:73/367 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IAAKKIAEAEDLVKQAEKSLKLSMLKWVPDYDSAADEYSKAATAYRIAKSYDKSKECFLKAIDAY 68
            :||:||.|..:.:.:|||.||...|||.|||||||.||.|||.|::.||.::::|:..|:...|:
Mouse     1 MAAQKINEGLEHLAKAEKYLKTGFLKWKPDYDSAASEYGKAAVAFKNAKQFEQAKDACLREAVAH 65

  Fly    69 KNNKSWFHAAKAYEQIILLSKDADKLHEVEEYANKSASLYQQHGSPEAAASALDKAAKLTESKHP 133
            :||::.|||||||||..::.|:..||.|..:...|::.:|.::|:|:.||.||::|.||.|:..|
Mouse    66 ENNRALFHAAKAYEQAGMMLKEMQKLPEAVQLIEKASMMYLENGTPDTAAMALERAGKLIENVDP 130

  Fly   134 DMALRFYQHALEVIMIEDSVRQAAEYASKVSRILVKLRRYDEATNALKKEISLNQQTESY----- 193
            :.|::.||....|...|:.:|||.|...|.||:||:.||:|||..:::||.::.::.|:|     
Mouse   131 EKAVQLYQQTANVFENEERLRQAVELLGKASRLLVRGRRFDEAALSIQKEKNIYKEIENYPTCYK 195

  Fly   194 ---------------------------GQ-------------IG-----RLVVALVMVQLARGDS 213
                                       |:             :|     :..:|.|:|.|.|.|.
Mouse   196 VEFWSPAERTGTGTKRTGTDPREEEHLGKGNPLCVWPTQILAVGTWDRPKKTIAQVLVHLHRNDY 260

  Fly   214 VEAEKTFREW-------GNCCEPEEVSTLQTLLQAFDDEDPELAARMLASPFIRHMDVEYAILSK 271
            |.||:..||.       |:    |:.:.|:.||:.:|.:|.:..:.:..||..::||.:||.|..
Mouse   261 VAAERCVRESYSIPGFNGS----EDCAALEQLLEGYDQQDQDQVSEVCNSPLFKYMDNDYAKLGL 321

  Fly   272 NIPLPQGIQMEKK-----------AGDTAAETNDAEDEGGLC 302
            ::.:|.| .::||           |...|||..:.|..||||
Mouse   322 SLVVPGG-GIKKKSPATPQAKPDGAAGMAAEEEEDEYSGGLC 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaSnap1NP_477469.1 SNAP 11..248 CDD:451671 98/293 (33%)
TPR repeat 33..70 CDD:276937 17/36 (47%)
TPR repeat 74..111 CDD:276937 15/36 (42%)
TPR repeat 114..149 CDD:276937 14/34 (41%)
TPR repeat 153..187 CDD:276937 16/33 (48%)
NapgNP_001406305.1 SNAP 8..328 CDD:276937 106/323 (33%)
TPR repeat 30..67 CDD:276937 17/36 (47%)
TPR repeat 71..108 CDD:276937 15/36 (42%)
TPR repeat 111..146 CDD:276937 14/34 (41%)
TPR repeat 150..186 CDD:276937 16/35 (46%)

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