DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaSnap1 and Napg

DIOPT Version :9

Sequence 1:NP_477469.1 Gene:gammaSnap1 / 37842 FlyBaseID:FBgn0028552 Length:302 Species:Drosophila melanogaster
Sequence 2:XP_011245108.1 Gene:Napg / 108123 MGIID:104561 Length:362 Species:Mus musculus


Alignment Length:365 Identity:122/365 - (33%)
Similarity:194/365 - (53%) Gaps:69/365 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IAAKKIAEAEDLVKQAEKSLKLSMLKWVPDYDSAADEYSKAATAYRIAKSYDKSKECFLKAIDAY 68
            :||:||.|..:.:.:|||.||...|||.|||||||.||.|||.|::.||.::::|:..|:...|:
Mouse     1 MAAQKINEGLEHLAKAEKYLKTGFLKWKPDYDSAASEYGKAAVAFKNAKQFEQAKDACLREAVAH 65

  Fly    69 KNNKSWFHAAKAYEQIILLSKDADKLHEVEEYANKSASLYQQHGSPEAAASALDKAAKLTESKHP 133
            :||::.|||||||||..::.|:..||.|..:...|::.:|.::|:|:.||.||::|.||.|:..|
Mouse    66 ENNRALFHAAKAYEQAGMMLKEMQKLPEAVQLIEKASMMYLENGTPDTAAMALERAGKLIENVDP 130

  Fly   134 DMALRFYQHALEVIMIEDSVRQAAEYASKVSRILVKLRRYDEATNALKKEISLNQQTESY----- 193
            :.|::.||....|...|:.:|||.|...|.||:||:.||:|||..:::||.::.::.|:|     
Mouse   131 EKAVQLYQQTANVFENEERLRQAVELLGKASRLLVRGRRFDEAALSIQKEKNIYKEIENYPTCYK 195

  Fly   194 ---------------------------GQ-------------IG-----RLVVALVMVQLARGDS 213
                                       |:             :|     :..:|.|:|.|.|.|.
Mouse   196 VEFWSPAERTGTGTKRTGTDPREEEHLGKGNPLCVWPTQILAVGTWDRPKKTIAQVLVHLHRNDY 260

  Fly   214 VEAEKTFREWGNCCEP-----EEVSTLQTLLQAFDDEDPELAARMLASPFIRHMDVEYAILSKNI 273
            |.||:..||  :...|     |:.:.|:.||:.:|.:|.:..:.:..||..::||.:||.|..::
Mouse   261 VAAERCVRE--SYSIPGFNGSEDCAALEQLLEGYDQQDQDQVSEVCNSPLFKYMDNDYAKLGLSL 323

  Fly   274 PLPQGIQMEKK-----------AGDTAAETNDAEDEGGLC 302
            .:|.| .::||           |...|||..:.|..||||
Mouse   324 VVPGG-GIKKKSPATPQAKPDGAAGMAAEEEEDEYSGGLC 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaSnap1NP_477469.1 SNAP 11..248 CDD:305195 98/291 (34%)
TPR repeat 33..70 CDD:276937 17/36 (47%)
TPR repeat 74..111 CDD:276937 15/36 (42%)
TPR repeat 114..149 CDD:276937 14/34 (41%)
TPR repeat 153..187 CDD:276937 16/33 (48%)
NapgXP_011245108.1 SNAP 8..328 CDD:276937 106/321 (33%)
TPR repeat 30..67 CDD:276937 17/36 (47%)
TPR repeat 71..108 CDD:276937 15/36 (42%)
TPR repeat 111..146 CDD:276937 14/34 (41%)
TPR repeat 150..186 CDD:276937 16/35 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849672
Domainoid 1 1.000 180 1.000 Domainoid score I3488
eggNOG 1 0.900 - - E1_KOG1585
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2838
Inparanoid 1 1.050 211 1.000 Inparanoid score I3645
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55184
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003744
OrthoInspector 1 1.000 - - otm42549
orthoMCL 1 0.900 - - OOG6_103437
Panther 1 1.100 - - LDO PTHR13768
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4330
SonicParanoid 1 1.000 - - X4180
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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