DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaSnap1 and napg

DIOPT Version :10

Sequence 1:NP_477469.1 Gene:gammaSnap1 / 37842 FlyBaseID:FBgn0028552 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_001107507.1 Gene:napg / 100135361 XenbaseID:XB-GENE-967831 Length:314 Species:Xenopus tropicalis


Alignment Length:319 Identity:128/319 - (40%)
Similarity:194/319 - (60%) Gaps:25/319 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IAAKKIAEAEDLVKQAEKSLKLSMLKWVPDYDSAADEYSKAATAYRIAKSYDKSKECFLKAIDAY 68
            :||:||.||.:.:.:|||.||.|.|||.|||||||.||||||.|::.||.||:::|.|||..::|
 Frog     1 MAAQKINEALEHLAKAEKCLKTSFLKWKPDYDSAASEYSKAAVAFKNAKQYDQAREAFLKEAESY 65

  Fly    69 KNNKSWFHAAKAYEQIILLSKDADKLHEVEEYANKSASLYQQHGSPEAAASALDKAAKLTESKHP 133
            :|||:.|||||||||..::.|:..||.|..:...|::.:|.::|:|:.||.||::|.||.|..:.
 Frog    66 ENNKALFHAAKAYEQAGMMLKEMQKLPEAVQLIEKASMMYLENGTPDTAAMALERAGKLIELVNL 130

  Fly   134 DMALRFYQHALEVIMIEDSVRQAAEYASKVSRILVKLRRYDEATNALKKEISLNQQTESYGQIGR 198
            :.|::.||.:..|...|:.:|||.|...|.||:||:.||.|||..:::||.::.::.|:|....:
 Frog   131 EKAVQLYQQSASVFENEERLRQAVELLGKASRLLVRARRLDEAVASIQKEKNMYKEIENYPTCYK 195

  Fly   199 LVVALVMVQLARGDSVEAEKTFRE-------WGNCCEPEEVSTLQTLLQAFDDEDPELAARMLAS 256
            ..:|.|:|.|.|.|.|.|||..||       .|:    |:...|:.||:.:|.:|.:..:.:..|
 Frog   196 KTIAQVLVHLHRNDFVAAEKCVRESYSIPGFSGS----EDCIALEQLLEGYDQQDLDQVSEVCNS 256

  Fly   257 PFIRHMDVEYAILSKNIPLPQGIQMEK-------------KAGDTAAETNDAEDEGGLC 302
            |..::||.:||.|:.::.:|.|...:|             :.|..|||.:| |..||||
 Frog   257 PLFKYMDNDYAKLALSLAVPGGGNKKKSSAPPSVTETRQAQGGAQAAEEDD-EYSGGLC 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaSnap1NP_477469.1 SNAP 11..248 CDD:451671 104/243 (43%)
TPR repeat 33..70 CDD:276937 22/36 (61%)
TPR repeat 74..111 CDD:276937 15/36 (42%)
TPR repeat 114..149 CDD:276937 13/34 (38%)
TPR repeat 153..187 CDD:276937 16/33 (48%)
napgNP_001107507.1 SNAP 8..278 CDD:276937 112/273 (41%)
TPR repeat 30..67 CDD:276937 22/36 (61%)
TPR repeat 35..63 CDD:276809 16/27 (59%)
TPR repeat 68..104 CDD:276809 16/35 (46%)
TPR repeat 71..108 CDD:276937 15/36 (42%)
TPR repeat 111..146 CDD:276937 13/34 (38%)
TPR repeat 114..139 CDD:276809 10/24 (42%)
TPR repeat 150..186 CDD:276937 16/35 (46%)

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