DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tsr and cfl1

DIOPT Version :10

Sequence 1:NP_477034.1 Gene:tsr / 37841 FlyBaseID:FBgn0011726 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_998878.1 Gene:cfl1 / 407855 XenbaseID:XB-GENE-1016481 Length:168 Species:Xenopus tropicalis


Alignment Length:168 Identity:53/168 - (31%)
Similarity:81/168 - (48%) Gaps:41/168 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASGVTVS-DVCKT----------TYEEIKKDKKHRYVIFYIRDEKQI------------DVETV 42
            |||||.|| ||.|.          :.||.||.||  .|:|.:.::|::            ||...
 Frog     1 MASGVMVSDDVIKVFNDMKVRHQLSPEEAKKRKK--AVVFCLSEDKKMIILEPGKEILQGDVGCN 63

  Fly    43 ADRNAEYDQFLEDIQKCGPGECRYGLFDFEYMHQCQGTSESSKKQKLFLMSWCPDTAKVKKKMLY 107
            .|  ..|..|::.:.:   .:|||.|:|..|      .::.:||:.|..:.|.|:.|.:|.||:|
 Frog    64 VD--DPYKAFVKMLPR---NDCRYALYDALY------ETKETKKEDLVFVFWAPEEASLKSKMIY 117

  Fly   108 SSSFDALKKSLVGVQKYIQAT---DLSEASREAVEEKL 142
            :||.||:||...|::...|..   |:::....|  |||
 Frog   118 ASSKDAIKKRFPGIKHEWQTNTFEDINDPCNLA--EKL 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tsrNP_477034.1 ADF_cofilin_like 3..142 CDD:200442 49/164 (30%)
cfl1NP_998878.1 ADF_cofilin_like 3..153 CDD:200442 49/164 (30%)
Nuclear localization signal. /evidence=ECO:0000255 30..34 2/3 (67%)

Return to query results.
Submit another query.