DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment IntS1 and Ints1

DIOPT Version :9

Sequence 1:NP_611875.1 Gene:IntS1 / 37840 FlyBaseID:FBgn0034964 Length:2053 Species:Drosophila melanogaster
Sequence 2:XP_038945895.1 Gene:Ints1 / 288514 RGDID:1308908 Length:2225 Species:Rattus norvegicus


Alignment Length:2288 Identity:708/2288 - (30%)
Similarity:1126/2288 - (49%) Gaps:337/2288 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDRGKGSGSNR-SQKKVPLG----GELFALG-KSVRDDSKSKILPIKGMSS---SDRKREASTAL 56
            |:|.|.:...| |....|.|    |:..||| |...::||:....:|...|   |:|||:||.:|
  Rat    28 MNRAKPTTVRRPSAAAKPSGHPPPGDFIALGSKGQANESKTASTLLKPAPSGLPSERKRDASASL 92

  Fly    57 ASSS------KRFR----------GNLKDAGAPDMSSGSSQCETWEQFAVDCD-LDTVV--ETIY 102
            :.:|      ||.:          |.|.:|...:..:.|...:  |...|..: |.||:  |...
  Rat    93 SGASGLTGLTKRPKLSSTPPLSALGRLAEAAVAEKRAISPSIK--EPSVVPIEVLPTVLLDEIEA 155

  Fly   103 AALEQNDSETVGRLVCGVIKQTTTSSSRSKVDNIALLALIYVAKVQPSIFCTDIVACALLSFLRR 167
            |.||.||....| ::||.:||...  :|:|.|:...|:|:|:||::|:||.|:.|..||.|.|||
  Rat   156 AELEGNDDRIEG-VLCGAVKQLKV--TRAKPDSTLYLSLMYLAKIKPNIFATEGVIEALCSLLRR 217

  Fly   168 EA--NVKMRYNTNLHILFANLLTRGFMEISQWPEVLLRIYIDDAVNERYWADNELCAPLVKNICA 230
            :|  |.|.:.|:.:.:|..|||...:.|...|||:.:::||:|::.||.|.|:..|...|.||..
  Rat   218 DASVNFKAKGNSLVSVLACNLLMAAYEEDENWPEIFVKVYIEDSLGERIWVDSPHCRTFVDNIQT 282

  Fly   231 AFKTRTPHIS-LLRWDVSSS---LPSGQAHRDSMTVDDDSGDNSTQSLDASPLNTESEPIPDAMC 291
            ||.|:.|..| ||:.:.:.|   |.:|.:...|:|.::||   .|:.|.|   ..:..|..:...
  Rat   283 AFNTKMPPKSVLLQGEGARSGGELGAGSSPHPSLTEEEDS---QTELLIA---EEKLSPEQEGQL 341

  Fly   292 TTKSRFSDAV--VQKHVSDAIRDQLNKRQQQDNYTRNFLKFLCTTSGIAEVRCLSISRLELWIHN 354
            ..:.|:.:..  |:::|.|.:|||||:||..||.:||.|:.|..|.|..|||.|::.|||:|:.|
  Rat   342 MPRPRYDELTESVEEYVLDMLRDQLNRRQPIDNVSRNLLRLLTATCGYKEVRLLAVQRLEMWLQN 406

  Fly   355 GKLVKFAQQLLSYICFNIKGRNTQDNEVLLVLVKMRLKTKPLINHYMSCLKEMIFLQPEILSTVM 419
            .||.:.||.||..:|.|.....::|.:|:..|:|:|||.|.|:||||.|::|::....:.|.|.:
  Rat   407 PKLTRPAQDLLMSVCMNCNSHGSEDMDVISHLIKIRLKPKVLLNHYMLCIRELLNAHKDNLGTTI 471

  Fly   420 KLVVQNELSNTRNPNNMGMLATMFQTSADQSAATLAEIYQEFLLQRDDCLRTLRVFLRELVRMLR 484
            |.|:.|||||.||||||.:|.|:.|.|::.:...||.::|:.|..:||.||..|..|||:::..:
  Rat   472 KFVIFNELSNARNPNNMQILYTVLQHSSELAPKFLAMVFQDLLTNKDDYLRASRALLREIIKQTK 536

  Fly   485 FDVNLVKFCKTFLSEREDLTPQIEMFEFKERIFNSMVDIVCLCMFLSATPQAREASLSLKTNRDT 549
            .::|...||...:.||::  ||....|||||....:.|::.:.|.|..|.|.:||.::  .::..
  Rat   537 HEINFQAFCLGLMQERKE--PQYLEMEFKERFVVHITDVLAVSMMLGITAQVKEAGVA--WDKGE 597

  Fly   550 KNNHALLKLY-NQMSQIQLDTVSWMYETVPTLFKIPAAEYHQALHKLLLLDSPEQYSRCDQWPSE 613
            |.|..:|:.: ||::.||.|.|.|::..||::.|:...:|...|||:|..:.||.|.:.|.||.|
  Rat   598 KRNLEVLRTFQNQIAAIQRDAVWWLHTVVPSISKLAPKDYVHCLHKVLFTEQPETYYKWDNWPPE 662

  Fly   614 PERGAILRIISETPIHEETLLRIILIGITKDIPFSIANTFDVLLLVIKRVSGMKATNIPAVQANK 678
            .:|...||:.||.||.|:||:||::||:::::|...|:..::...::||.:.::|.::..::..:
  Rat   663 SDRNFFLRLCSEVPILEDTLMRILVIGLSRELPLGPADAMELADHLVKRAAAVQADDVEVLKVER 727

  Fly   679 FDIIDFLFSMSEYHHPENIRLPAEYEPPKLAIIAFYWKAWLILLMISAHNPSSFGAFCWDHYPTM 743
            ..:||.:.::..|||||||:||..|:||.|||...|||||.:||:::|.||.:.|...|:.|||:
  Rat   728 IQLIDAVLNLCTYHHPENIQLPPGYQPPNLAISTLYWKAWPLLLVVAAFNPENIGLAAWEEYPTL 792

  Fly   744 KMMMEICITNQFNNSSAT-----------KDELQIITMERDHILQFETYLAAQTSPHAVITEETA 797
            ||:||:.:||.::....|           ..||||...|:..||.||.:||| .|....|||.::
  Rat   793 KMLMEMVMTNNYSYPPCTLTDEETRTEMINRELQISQREKQEILAFEGHLAA-ASTKQTITESSS 856

  Fly   798 ILITQLMLMDPMGTPRKVPSMVLDQLKFLNQTYKLGHLFCRCRKPDLLLDIIQRQGTTQSMPWLS 862
            :|::||..:||.|.||:.|..:|||:|.|||:.:||||.||.|.||.||.|||||.::||||||:
  Rat   857 LLLSQLTSLDPQGPPRRPPPHILDQVKALNQSLRLGHLLCRSRNPDFLLHIIQRQASSQSMPWLA 921

  Fly   863 DLVQNSEGDFSHLPVQCLCEFLLFNAHIINEENSRDAE-------------------LVNFLRNL 908
            ||||:|||....|||||||||||.:|.........|.|                   |:..|::|
  Rat   922 DLVQSSEGSLDVLPVQCLCEFLLHDAADATASGEEDDEGESREQKAKKRQRQQKQRQLLGRLQDL 986

  Fly   909 IFDGNLSHQIVCELLDYIFRRLSSTVKQSRVAALSGLKIIFRHSG--DFEN-------------- 957
            :.......|..||:|||..|||.|:...|||.|:.||.::....|  |.|.              
  Rat   987 LLGPKADEQTTCEVLDYFLRRLGSSQVASRVLAMKGLSLVLSEGGLRDKEEKEPPMEEDVGEADA 1051

  Fly   958 ----EWLLKSLQQIPHFYEVKPFIIPQLRAACQVENCPELIMAYIQFITAHTLNDPVNEMLDH-- 1016
                :|||:.|.::|.|..|:......|:.|..:|..|:.|.||:.:::.||   ||.|...|  
  Rat  1052 LQGYQWLLRDLPRLPLFDSVRTTTALALQQAIHMETDPQTISAYLIYLSQHT---PVEEQGPHSD 1113

  Fly  1017 -VIDMAQLIVERSTMFQHIIISQEDYDYVPDENRIQTLKCLFVMFNNYIIKLR---EYHEPYEWT 1077
             .:|:|:|:|||||:..| :.|:.......|    ..|..|..:|:.|:.::|   |..|.|.|:
  Rat  1114 LALDVARLVVERSTIMAH-LFSKPSCSTASD----AVLSALLSVFSRYVRRMRKSKEGEEVYSWS 1173

  Fly  1078 EYPDLLMVQFDDGVQLPLHINIIHAFIILLTYS--NSNMPESIPILDYWFPPGRPAPVAFLPSMP 1140
            |..|.:.:::..|....:||.::||.:||||..  .|...|...:||.|||..:|.|.|||....
  Rat  1174 ESQDQVFLRWTSGETATMHILVVHAMVILLTLGPPRSGDSEFSELLDIWFPEKKPLPTAFLVDTS 1238

  Fly  1141 QEQVQLLPDWLKLKMIRSSVDRLIEAALNDLTPDQIVLFVQNFGTPVNSMSKLLAMLDTAVLEQF 1205
            :|.: ||||||||:||||.|.||::|||.||.|.|::||||:||.||:||||||..||.||.:..
  Rat  1239 EEAL-LLPDWLKLRMIRSEVPRLVDAALQDLEPQQLLLFVQSFGIPVSSMSKLLQYLDQAVAQDP 1302

  Fly  1206 DLVKNAILNKAYLAQLIEIQQARGAKNGHYTVQALDLHSHSQTVPDLPKISVVIQEAVEIDDYDS 1270
            ..::..|::|.|:|.|:|:|..|||..|.        ..||.....||.    .:::.|....:|
  Rat  1303 QTLEQNIMDKNYMAHLVEVQHERGASGGQ--------TFHSLLTASLPP----RRDSTEAPKPES 1355

  Fly  1271 S--------------------DSDDRPTNFLATKEVAQTILTQPD---QLTESRSDCRSLIQKLL 1312
            |                    ..||....||      |.....||   |.:..|....:|.|.|.
  Rat  1356 SPEPPPGQGRTRAGTQVPVLGPEDDLAGIFL------QIFPLSPDPRWQSSSPRPLALALQQALG 1414

  Fly  1313 DMLASPNSNRADVVNAITEVLAVGCSVTMSRHACT------------------------------ 1347
            ..||.......:|......:|....::..|.|..|                              
  Rat  1415 QELARVRQGNPEVPGITVRLLQAMATLLSSPHGGTLALAMHHSHFLSCPLMRQLCQYQRAVPQDT 1479

  Fly  1348 -----FLRTFFSCMLHSDKYHILENALQKNLSMF------KHTFAD--SSLLQKSEL--YHESLV 1397
                 ||:.....:...|...:.:..||..|.:|      :...:|  |.||..:|.  :|..|.
  Rat  1480 GFSSLFLKVLMQILQWLDSPAVEDGPLQAQLKLFATRYSARRRISDVRSGLLHLAEALSFHRDLE 1544

  Fly  1398 FMLRNSREIYA-----QQFKANTALVARKRIVRAIVQ----SFD--------------------- 1432
            .....:|.:.|     ::......|::  :::|.:::    .|:                     
  Rat  1545 VANSTARAVIATLRSGEKCTVEPELIS--KVLRGLIEVRSPHFEELLTALFSATAETCPSPASGP 1607

  Fly  1433 ---------QTKD-----SKTVAKSKSDQLFH----NGLFIDWLSEMDPEIV-STQLMKERFLFS 1478
                     |.:|     |...|:..|.:...    :||.:|||..:|||:| |...::.:.|||
  Rat  1608 IVVVSSLLLQERDEPLGPSTQDAEGASTEAMRLGPASGLLVDWLETLDPEVVCSCPDLQWKLLFS 1672

  Fly  1479 K---------SCSEFRFYLLSLINHQTNWDTIERIAEYLF-KNFHEDYDYATVLNYFEALTTNPK 1533
            :         ....||.|||:|:.||.:|.|:.|....|. |:..:..|.:..|::..|....|:
  Rat  1673 RRKGKGHISAQVLSFRPYLLALLTHQASWSTLHRCTRVLLSKSREQRLDPSASLDFLWACIHVPR 1737

  Fly  1534 LWKGRDKYMSKNVRPDAFFMLRTSELEPFSHFILHEGLSEVKLDSKNYDFK----LCSRMNLLFK 1594
            :|:|||:...:..|.:....::..||......|    |||.:..|::.|..    :.:|:.||..
  Rat  1738 IWQGRDQRTPQKRREELVLHVQGPELLSLVELI----LSEAETRSQDGDSAARTLIQTRLPLLLS 1798

  Fly  1595 LTEKRRDLMVKVMEHVEK------SSVSDYLKLQVLQQMYIMYPRIKFLKP-------GKTGEQA 1646
            ......:.:.||.||:..      .||.......:|.|:|:..|.::...|       |.|....
  Rat  1799 CCRSNDESIGKVTEHLTSCIQQWGDSVLGQRCRDLLLQLYLQRPEVRVPVPEVLLQSEGATSSSI 1863

  Fly  1647 YKLQNLKGCQADKVSNNLITCLGSLVGKKDFETLSTDTELLLRKLAASHPLLFLRQLGVLSSIMQ 1711
                    |:.|.:.:..||.|......:..|:...|..:..||||.:||:|.||.|.::::::.
  Rat  1864 --------CKLDGLIHRFITLLADTSDSRSSESRVADANMACRKLAVAHPILLLRHLPMIAALLH 1920

  Fly  1712 GRAQLSMKALREEHHFHRFVQILRTLELLQPTIFEEAYKNEIQNTLSCYFN-FFKHHSNVKEACQ 1775
            ||..|:.:..|:::|...::.:|..||||||.:|:..::..:.:.|..:.. ...:..:.::...
  Rat  1921 GRTHLNFQEFRQQNHLAFYLHVLGILELLQPRVFQSEHQGALWDCLRSFIRLLLNYRKSSRQLAP 1985

  Fly  1776 MLNKFVQMLQAYINYNPSSALLFIEQYVGILKELAAKYTSLGKLQVLVQAVALLQHKSHSATELD 1840
            .::||||.:..|:..:..:|:.|::::...|.:|:...:.|..|:.|:..::|......:...||
  Rat  1986 FISKFVQFIHKYVACSAPAAVAFLQKHAEPLHDLSFDNSDLVMLKSLLAGLSLPSRDGRADQGLD 2050

  Fly  1841 DE-EVKYEYDLDEHFDVKPSASKPVVTEDPIEVNPQTPIDPSSSRGPLSVLTLGSYSRSNYTDIS 1904
            :| |.|       ..|.:.:.|.|:|:     |:..||:                    ...|::
  Rat  2051 EEGEGK-------RADERSAGSLPLVS-----VSLSTPL--------------------TVADVA 2083

  Fly  1905 PHFLDLVKIIKQSNTEDVVLGPMQELECLTSKRFVFINELFERLLNLIFSPSAQIRSIAFIILIR 1969
            ||    :|.:.:....:.||..:.:::.::.:|...:......|..|:.|.....|::||.:.:|
  Rat  2084 PH----MKRLSRGQAVEDVLETLSDIDEMSRRRPEVLGFFSTNLQRLMSSAEESCRNLAFSLALR 2144

  Fly  1970 HLKHNPGNSDINLCTLNAYIQCLRDENSSVAATAIDNLPEMSVLLQEHAIDILTVAFSLGLKSCL 2034
            .:::||   .|....|..::.||...:..|..||:.||||.::|.||||..:|..||.:|:...:
  Rat  2145 SIQNNP---SIAADFLPTFMYCLGSRDFEVVQTALRNLPEYTLLCQEHAAVLLHRAFLVGMYGQI 2206

  Fly  2035 NTGHQIRKVLQTL 2047
            :|..||.:.|:.|
  Rat  2207 DTSAQISEALKIL 2219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IntS1NP_611875.1 DUF3677 327..407 CDD:289217 35/79 (44%)
Ints1XP_038945895.1 DUF3677 379..459 CDD:403584 35/79 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351292
Domainoid 1 1.000 138 1.000 Domainoid score I4718
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H53111
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D178763at33208
OrthoFinder 1 1.000 - - FOG0006612
OrthoInspector 1 1.000 - - otm45937
orthoMCL 1 0.900 - - OOG6_107095
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5610
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.750

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