DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment IntS1 and ints1

DIOPT Version :9

Sequence 1:NP_611875.1 Gene:IntS1 / 37840 FlyBaseID:FBgn0034964 Length:2053 Species:Drosophila melanogaster
Sequence 2:XP_002942086.3 Gene:ints1 / 100380131 XenbaseID:XB-GENE-5888682 Length:2186 Species:Xenopus tropicalis


Alignment Length:2289 Identity:712/2289 - (31%)
Similarity:1132/2289 - (49%) Gaps:351/2289 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDRGKGSGSNRSQKKV-----PLGGELFALG-KSVRDDSKSK---ILPIKGMSSSDRKREASTAL 56
            |:|.|.:...|.....     |..|:..||| |....|||:.   :.|.....||:|||||:|.|
 Frog     1 MNRPKTAAVRRPSAAAKSSGHPPPGDFIALGSKGQNTDSKASSNLLKPAASGLSSERKREATTTL 65

  Fly    57 ASSS------KRFR----------GNLKDAGAPDMSSGSSQCETWEQFAVDCDLDTVVETIYAAL 105
            ||:|      ||.:          |.|.||...:..:.|...:......::....::::.|.|:.
 Frog    66 ASTSALTGLTKRPKLSSTPPLSALGKLADAAVAEKRAISPSIKEPSVVPIEVPPASLLDDIDASE 130

  Fly   106 EQNDSETVGRLVCGVIKQTTTSSSRSKVDNIALLALIYVAKVQPSIFCTDIVACALLSFLRREA- 169
            ...:.:.:..::||.:||  ...:|:|.|....|:|:|:||::|:||.|:.|..||.|.|||:| 
 Frog   131 SDGNDDRIEGVLCGAVKQ--LKMNRAKPDPTLYLSLMYLAKMKPNIFATEGVIEALCSLLRRDAT 193

  Fly   170 -NVKMRYNTNLHILFANLLTRGFMEISQWPEVLLRIYIDDAVNERYWADNELCAPLVKNICAAFK 233
             |.|.:.|:.:.:|..|||...:.|...|||:.:::||:|::.||.|.|::.|...|.||..||.
 Frog   194 INFKAKGNSLVSVLACNLLMAAYEEDENWPEIFVKVYIEDSLGERIWVDSQHCKTFVDNIQTAFC 258

  Fly   234 TRTPHISLLRWD----VSSSLPSGQAHRDSMTVDDDSGDNSTQSLDASPLNTESEPIPDAMCTTK 294
            |:.|..|::...    .:..|.:|.:...||..::||        .:..|..|.:..|:......
 Frog   259 TKMPPKSMVLHSETGRTAGDLSAGNSPHPSMPDEEDS--------QSELLIAEEKLSPEDEGQVM 315

  Fly   295 SRFSDAV--VQKHVSDAIRDQLNKRQQQDNYTRNFLKFLCTTSGIAEVRCLSISRLELWIHNGKL 357
            .|:.:..  |:::..|.:|||||:||..||.:||.|:.|..|.|..|||.:::.|||:|:.|.||
 Frog   316 PRYDELAESVEEYALDMLRDQLNRRQPMDNVSRNLLRLLTATCGYKEVRMMAVQRLEMWLQNPKL 380

  Fly   358 VKFAQQLLSYICFNIKGRNTQDNEVLLVLVKMRLKTKPLINHYMSCLKEMIFLQPEILSTVMKLV 422
            .:.||:||..:|.|......:|.||:..|:|:|||.|.|:||||..::|::....:.|.|::|.|
 Frog   381 TRPAQELLMSVCMNCNTHGPEDMEVISNLIKIRLKPKVLLNHYMLSVRELLNAHRDNLGTLVKFV 445

  Fly   423 VQNELSNTRNPNNMGMLATMFQTSADQSAATLAEIYQEFLLQRDDCLRTLRVFLRELVRMLRFDV 487
            :.|||||.||||||.:|.|:.|.|::.:...||.::|:.|..:||.||..|..|||:::..:.::
 Frog   446 IFNELSNARNPNNMQVLYTVLQHSSELAPKFLAMVFQDLLTNKDDYLRASRALLREIIKQTKHEI 510

  Fly   488 NLVKFCKTFLSEREDLTPQIEMFEFKERIFNSMVDIVCLCMFLSATPQAREASLSLKTNRDTKNN 552
            |...||...:.||::  .|....|||||....:.|::.:.|.|..|.|.:||.::.... :.||.
 Frog   511 NFQAFCLGLMQERKE--AQYTDMEFKERFVIHITDLLAVSMMLGITAQVKEAGVAWDKG-EKKNL 572

  Fly   553 HALLKLYNQMSQIQLDTVSWMYETVPTLFKIPAAEYHQALHKLLLLDSPEQYSRCDQWPSEPERG 617
            ..|....||::.||.|.|.|::..|||:.|:...:|...|||:|..:.||.|.:.|.||.|.:|.
 Frog   573 EVLRSFQNQIAAIQRDAVWWLHTVVPTICKLSPKDYVHCLHKVLFTEQPETYYKWDNWPPESDRN 637

  Fly   618 AILRIISETPIHEETLLRIILIGITKDIPFSIANTFDVLLLVIKRVSGMKATNIPAVQANKFDII 682
            ..||:.||.|:.|:||:||::||:::|:|...|:..::...::||.:.::|.::..::..:..::
 Frog   638 FFLRLCSEVPLLEDTLMRILVIGLSRDLPLGPADAMELADHLVKRAAAVQADDLEVLRIERIQLL 702

  Fly   683 DFLFSMSEYHHPENIRLPAEYEPPKLAIIAFYWKAWLILLMISAHNPSSFGAFCWDHYPTMKMMM 747
            |.:.::..|||||||:||..|:||.|||...|||||.:||:::|.||.:.|...|:.|||:||:|
 Frog   703 DAVLNLCTYHHPENIQLPPGYQPPNLAISTLYWKAWPLLLVVAAFNPENLGLAAWEEYPTLKMLM 767

  Fly   748 EICITNQFNNSSAT-----------KDELQIITMERDHILQFETYLAAQTSPHAVITEETAILIT 801
            |:.:||.::....|           ..||||...|:..||.||::||| .|....|||..::|::
 Frog   768 EMVMTNNYSFPPCTVTEEETRTEIINRELQISQREKQEILAFESHLAA-ASTKQTITESNSLLLS 831

  Fly   802 QLMLMDPMGTPRKVPSMVLDQLKFLNQTYKLGHLFCRCRKPDLLLDIIQRQGTTQSMPWLSDLVQ 866
            ||..:||.|.||:.|...::|:|.|||:.:||||.||.|.||.||:|||||.::||||||:||||
 Frog   832 QLTSLDPQGPPRRPPPHAIEQVKSLNQSLRLGHLLCRSRNPDFLLNIIQRQASSQSMPWLADLVQ 896

  Fly   867 NSEGDFSHLPVQCLCEFLLFNAHIIN------EEN-------------SRDAELVNFLRNLIFDG 912
            :|||....|||||||||||.:|...:      |||             .:..:|:..|::|:...
 Frog   897 SSEGSLDVLPVQCLCEFLLHDAADESGTGEDEEENESKEQRAKKQQRQQKQRQLLGRLQDLLLGP 961

  Fly   913 NLSHQIVCELLDYIFRRLSSTVKQSRVAALSGLKIIF----------------RHSGDFE----N 957
            ....|..||:|||..|||||....|||.|:.||.::.                ..|||.|    .
 Frog   962 KADEQTTCEVLDYFLRRLSSPQVASRVLAMKGLSMVLSEKGLRDTDDKDQSMDEDSGDSELMQGY 1026

  Fly   958 EWLLKSLQQIPHFYEVKPFIIPQLRAACQVENCPELIMAYIQFITAHTLNDPVNEMLDH---VID 1019
            :|||:.|..:|.|..||......|:.|..:|...:.|.||:.:::.|.   |:.:...|   .:|
 Frog  1027 QWLLRDLPNLPLFESVKGTTAVALQQAIHMETDLQTISAYLVYLSEHA---PIEDQAQHNDLALD 1088

  Fly  1020 MAQLIVERSTMFQHIIISQEDYDYVPDENRIQTLKCLFVMFNNYIIKLR---EYHEPYEWTEYPD 1081
            :|:|||||||:..|:.   ....|..:.:.:  |..|..:|:.::.::|   |..|.|.|:|..|
 Frog  1089 VARLIVERSTIMSHLF---SKLSYCSESSAV--LAALLSIFSCFVRRMRKSKEGDEVYSWSESQD 1148

  Fly  1082 LLMVQFDDGVQLPLHINIIHAFIILLTYS-NSNMPESIPILDYWFPPGRPAPVAFLPSMPQEQVQ 1145
            .:.:::..|....:||.::||.:||||.. .....:...:||.|||..:|.|.|||....:|.: 
 Frog  1149 QVFLRWSSGETATMHILVVHAMVILLTLGPPRGESDFFALLDIWFPEKKPLPTAFLVDTSEEAL- 1212

  Fly  1146 LLPDWLKLKMIRSSVDRLIEAALNDLTPDQIVLFVQNFGTPVNSMSKLLAMLDTAVLEQFDLVKN 1210
            ||||||||:||||.|.||::|||:||.|.|::||||:||.||:||||||..||.||.::...::.
 Frog  1213 LLPDWLKLRMIRSEVPRLVDAALHDLEPQQLLLFVQSFGIPVSSMSKLLQYLDQAVSQEPQALEQ 1277

  Fly  1211 AILNKAYLAQLIEIQQARGAKNGHYTVQALDLHSHSQTVPDLPKISVVIQEAVEIDDYDSSD--- 1272
            .|::|.|:|.|:|:|..|||..|             ||...|...|:..:.       ||::   
 Frog  1278 NIMDKNYMAHLVEVQHERGATGG-------------QTFHSLLTASIPPRR-------DSTELIK 1322

  Fly  1273 ---SDDRPTNFLATKEVAQTILTQPD--------QLTESRSDCR-----------SLIQKLLDML 1315
               |.:.|...:..:.|.|..:..|:        ||.....|.|           :|.|.|...|
 Frog  1323 RKASTETPQGQVRARAVTQIPVLGPEDDLAGMFLQLFPLNPDPRWQNFNPRPISLALQQALGQEL 1387

  Fly  1316 ASPNSNRADVVNAITEVL-AVGC--------SVTMSRH-----ACTFLR---------------- 1350
            |........:......:| |||.        ::.::.|     ||..:|                
 Frog  1388 ARIRQGNTQLTGIAVRLLQAVGALLNSPHSGALVLAMHRNHFIACPLMRLLYQYQRSVPQDTAFS 1452

  Fly  1351 -TFFSCMLHS----DKYHILENALQKNLSMF------KHTFAD---------------------- 1382
             .||..::..    |...:.|..|:..|..|      ||..:|                      
 Frog  1453 SLFFKVLMQMLQWLDSPGVEEGPLRAQLKSFAALYSSKHRISDVRSGFLHLAEALAFCREPDVIN 1517

  Fly  1383 -----------------------SSLLQ-----KSELYHESLVFMLRNSREIYAQQFKAN----- 1414
                                   |.:||     ||....|.|..:|..:.|. ..:|.|.     
 Frog  1518 STIRTIITTLKSGDKCNVEPELISKVLQGLIEAKSPYLEEFLTVLLSVTIET-TSRFTATGPVAL 1581

  Fly  1415 -TALVARKRIVRAIVQSFDQTKDSKTVAKSKSDQLFHNGLFIDWLSEMDPEIVST-QLMKERFLF 1477
             ::|:.::| ..:.::..:::..|:|.....|     :||.||||..:|||::|: ..:::|.||
 Frog  1582 VSSLLLQER-QESSIKKGNESCSSETARSYPS-----SGLLIDWLELLDPEVISSFPDLQQRLLF 1640

  Fly  1478 S--KSCS-----EFRFYLLSLINHQTNWDTIER-IAEYLFKNFHEDYDYATVLNYFEALTTNPKL 1534
            |  |..|     .||.|||:|:.||:||.|:.: ||..|.|...:.:|.:..|::..|....|::
 Frog  1641 SWNKGSSALQPPSFRPYLLALLTHQSNWTTLHQCIAILLSKQREQRFDPSASLDFLWACIHIPRI 1705

  Fly  1535 WKGRDKYMSKNVRPDAFFMLRTSELEPFSHFILHEGLSEVKLDSKNYDFKLC----SRMNLLFKL 1595
            |:|||:...:..|.:....|:.|||......|    :||.:...:..:...|    ||:.||...
 Frog  1706 WQGRDQRTPQKRRDEYVLRLKQSELLCLVDLI----ISEAETRGQGSEEIACPLIQSRLPLLINS 1766

  Fly  1596 TEKRRDLMVKVMEHV-------EKSSVSDYLKLQVLQQMYIMYPRIKFLKPG--KTGEQAYKLQN 1651
            .:..::.:.|||||:       ..||:..:.: ..|.|:|:..|.:....|.  .|.|.|   .:
 Frog  1767 CQGDQENIKKVMEHLISCIKQWGNSSLGKHCR-DFLLQLYLQLPELILPVPDILLTSEGA---TD 1827

  Fly  1652 LKGCQADKVSNNLITCLGSLVGKKDFETLSTDTELLLRKLAASHPLLFLRQLGVLSSIMQGRAQL 1716
            ...|:.|.:.:..||.|......|  |:..:|..:..||||.:||||.||.|.::::::.|||.|
 Frog  1828 SSTCKMDALIHRFITLLADTSDCK--ESRMSDANMACRKLAVAHPLLLLRHLPMIAALLHGRAHL 1890

  Fly  1717 SMKALREEHHFHRFVQILRTLELLQPTIFEEAYKNEIQNTL-SCYFNFFKHHSNVKEACQML--- 1777
            :....|:::|...|..:|..||||||.:|.    :|.|..| .|..:|.|...|.::..:.|   
 Frog  1891 NFHEFRQQNHLTFFTHVLGILELLQPQVFH----SERQEALWDCLVSFIKVLQNYRKYSRQLAAF 1951

  Fly  1778 -NKFVQMLQAYINYNPSSALLFIEQYVGILKELAAKYTSLGKLQVLVQAVALLQHKSHSATELDD 1841
             :||||.:..||..:..:|:.|:::....|..|:::.:.|..|:.|:..::|  .....|.|...
 Frog  1952 ISKFVQFIHKYITCDAQAAVSFLQKNSDPLHGLSSENSDLSMLKSLLAGLSL--PSRGGAQEKTS 2014

  Fly  1842 EEVKYEYDLDEHFDVKPSASKPVVTEDPIEVNPQTPIDPSSSRGPLSVLTLGSYSRSNYTDISPH 1906
            ||.|                                 |..|:.|.|..:::..::.....:::|:
 Frog  2015 EEEK---------------------------------DEESTTGSLPFVSVSMFTPLTAAEMAPY 2046

  Fly  1907 FLDLVKIIKQSNTEDVVLGPMQELECLTSKR---FVFINELFERLLNLIFSPSAQIRSIAFIILI 1968
               |.:|.:..:.|| :|..:.:::.::.:|   ..|....|:||::   |.....|::||.:.:
 Frog  2047 ---LKRISRSKSVED-ILQALSDIDEMSKRRPEILSFFASDFQRLMS---STEESCRNLAFSLAL 2104

  Fly  1969 RHLKHNPGNSDINLCTLNAYIQCLRDENSSVAATAIDNLPEMSVLLQEHAIDILTVAFSLGLKSC 2033
            |.::.||   .|....|..::.||...:..|..||:.||||.::|.||||..:|..||.:|:...
 Frog  2105 RTVQCNP---SIAADFLPTFMYCLGSRDFEVVQTALRNLPEYTLLCQEHAAVLLHRAFLVGMYGQ 2166

  Fly  2034 LNTGHQIRKVLQTL 2047
            ::|..||.:.|:.|
 Frog  2167 MDTSPQISEALKVL 2180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IntS1NP_611875.1 DUF3677 327..407 CDD:289217 34/79 (43%)
ints1XP_002942086.3 DUF3677 350..430 CDD:403584 34/79 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H53111
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D178763at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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