DRSC/TRiP Functional Genomics Resources

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Protein Alignment MAN1 and RBM23

DIOPT Version :9

Sequence 1:NP_001286812.1 Gene:MAN1 / 37838 FlyBaseID:FBgn0034962 Length:650 Species:Drosophila melanogaster
Sequence 2:XP_024305408.1 Gene:RBM23 / 55147 HGNCID:20155 Length:515 Species:Homo sapiens


Alignment Length:146 Identity:28/146 - (19%)
Similarity:50/146 - (34%) Gaps:39/146 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DKELHRKLIQSGFPSTPVT-------ETTRAVLI------EKLRKHTRA-DKLKKRSNKYVLYSK 61
            :.|..||.::..:||...:       ||:.:..|      ::.|.|.:: |:.:.||.....|.:
Human    66 EDEQQRKEVKKDYPSNTTSSTSNSGNETSGSSTIGETSKKKRSRSHNKSRDRKRSRSRDRDRYRR 130

  Fly    62 --EQQESPPFPQYHQYHAPQPPQNYANGLDNNNDLDQTGGSSAYNRSLDESDSSPLQLSASKMYA 124
              .:..||.....|:                :...|:..||.:.:|.....|....:       :
Human   131 RNSRSRSPGRQCRHR----------------SRSWDRRHGSESRSRDHRREDRVHYR-------S 172

  Fly   125 PPPVVASNYDGDCSPH 140
            ||......|....|||
Human   173 PPLATGYRYGHSKSPH 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MAN1NP_001286812.1 LEM 4..47 CDD:128813 10/49 (20%)
MSC <381..509 CDD:286487
RRM_Man1 542..631 CDD:240732
RBM23XP_024305408.1 RRM 143..514 CDD:330708 12/69 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0147
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D873705at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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