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Protein Alignment MAN1 and Rbm39
DIOPT Version :10
| Sequence 1: | NP_611873.1 |
Gene: | MAN1 / 37838 |
FlyBaseID: | FBgn0034962 |
Length: | 650 |
Species: | Drosophila melanogaster |
| Sequence 2: | XP_006235393.1 |
Gene: | Rbm39 / 362251 |
RGDID: | 1310071 |
Length: | 530 |
Species: | Rattus norvegicus |
| Alignment Length: | 94 |
Identity: | 22/94 - (23%) |
| Similarity: | 44/94 - (46%) |
Gaps: | 2/94 - (2%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 540 TPCLKIRHMFDSSEVDQANLKQSIVESIIEKVGTRCKICDVQLDVQSC--CVYIRCASEEDAGTI 602
|.|.::.:||:....::......|.:.:||:......:..:.:|..|. .||::|.|...|...
Rat 423 TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAA 487
Fly 603 HKEINGWWFDKRLISIKFLRLERYLSRFP 631
...::|.||..::|:..::.|..|.:.||
Rat 488 VNALHGRWFAGKMITAAYVPLPTYHNLFP 516
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| MAN1 | NP_611873.1 |
LEM |
4..47 |
CDD:128813 |
|
| RRM_Man1 |
542..631 |
CDD:409728 |
19/90 (21%) |
| Rbm39 | XP_006235393.1 |
SF-CC1 |
46..518 |
CDD:273721 |
22/94 (23%) |
|
Blue background indicates that the domain is not in
the aligned region.
|
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